KEGG   Capnocytophaga leadbetteri: CGC53_00315
Entry
CGC53_00315       CDS       T05313                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
clk  Capnocytophaga leadbetteri
Pathway
clk03420  Nucleotide excision repair
clk03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:clk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CGC53_00315
   03430 Mismatch repair
    CGC53_00315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clk03400]
    CGC53_00315
Enzymes [BR:clk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CGC53_00315
DNA repair and recombination proteins [BR:clk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CGC53_00315
   MMR (mismatch excision repair)
    Other MMR factors
     CGC53_00315
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_30 Viral_helicase1 ResIII AAA_11 DEAD
Other DBs
NCBI-ProteinID: ATA80904
UniProt: A0A250F6Y0
LinkDB
Position
56881..59226
AA seq 781 aa
MNLFSKELERLNAPQRAAVLQKEGPIIVIAGAGSGKTRVLTYRIANLMRQGVDAFNILAL
TFTNKAANEMKKRIADIVGNNEAKNLWMGTFHSVFARILRFEADKLGFPQNFTIYDTQDS
QRLINGIIKEKELDKDVYKYKQIQQRISSLKNNLITVRAYFNSPELIEADAARRQPRFGD
IYQEYVDRCFKAGAMDFDDLLLRTNELLNVFPEVLAKYQNRFQYILVDEYQDTNHSQYLI
VKALADRFHNICVVGDDAQSIYAFRGANINNILNFKSDYPEAKEYKLEQNYRSTKNIVEA
ANSVIEHNKIRLDKVVFTENELGEPIKVHRSATDADEGRFVAGSIFENKMQHQLPNGSFA
VLYRTNSQSRAIEDALRKRDIPYRIYGGLSFYQRKEIKDVLAYLRLIINPNDEEALVRII
NFPARGIGETTMEKLTLAANHYKKSLFEVMYNINKLPDLHINSTTRQKLTDFVVMILNFQ
ALNKEANAFEVAEQVAKKTGLLQEFKKDGTPEGIAKMENIEEMLNGIKDFVAGQEDIADS
TGSLTEYLEDVSLATDSDKEIGDEDRVALMTIHLAKGLEFPYVYVVGMEEDLFPLAKSIQ
SREELEEERRLFYVALTRAEKQAYLTYAENRYRWGQLSPSEPSRFIEEIEEKYLSYLTPT
LSNPNYRYKPLVNRDIFGEVDKSKLRLQKPISGTPPAKNAPTGEEQQKLRKLKPINAMQN
LASKDVYNGLDIGTNVYHERFGKGKVVGLEGSGNDKKAQINFEVGGLKNILLRFAKLTIV
N
NT seq 2346 nt   +upstreamnt  +downstreamnt
atgaacttattttcaaaggaattggaacggcttaacgctccccagcgtgcagcagtgctt
caaaaagaaggacctatcattgtaatagcaggtgcaggctcgggcaaaacgcgtgtgctg
acctatcgcatagctaaccttatgcggcaaggagtagacgcttttaacatacttgctctt
acttttacgaataaggctgccaacgaaatgaagaagcgaatcgccgatatagtgggcaat
aacgaggctaagaacctatggatgggtacttttcactccgttttcgcccgaatattgcga
tttgaagctgataagttgggttttccgcagaattttaccatttatgatacgcaagattcg
caacgtcttatcaatggtattataaaagagaaggaattagacaaagatgtgtacaaatat
aagcaaatacagcagcgaatatcgtctttaaagaataatcttatcactgtacgggcttat
tttaatagtccggaactgattgaggcagatgctgctaggcgacaaccgcgctttggggat
atttatcaggagtatgtagataggtgcttcaaagcaggggcaatggattttgatgattta
ctgctcagaaccaacgagttactaaacgtttttcctgaagtattagctaaataccaaaat
agatttcagtatatattggtagatgagtatcaagatactaaccactctcaatatctgatt
gtcaaggctttagctgaccgttttcacaatatatgcgtggtaggcgacgacgcacagagt
atttatgctttccgcggggcgaatatcaacaatattctgaacttcaaaagcgactatcct
gaagccaaggagtacaaattggagcagaattaccgctcgaccaagaatatcgtagaggct
gccaacagtgtgatagagcataataaaatacgcttagataaggtagtatttactgaaaat
gagttgggtgaacctataaaggtgcatcgcagtgctaccgatgctgatgagggacgattt
gtggcggggtctatctttgagaataagatgcagcatcagttgcctaatggtagctttgct
gtgctctaccgtaccaactcgcaatcgcgtgctatagaagatgcgctgagaaagcgggat
attccgtatcgtatttatgggggactttctttttatcaacgaaaagagataaaagatgta
ttggcttacctccggcttatcattaaccccaatgacgaagaggctttagtacgcattatt
aacttcccagcgcgtggtataggtgaaactacaatggaaaagctcactttagcggctaat
cattataaaaaatcgctatttgaggtgatgtacaacatcaataaactgcctgatttgcac
attaatagcactactcgacagaagctaactgacttcgtagtaatgatacttaactttcag
gcgcttaacaaagaggctaatgcttttgaggtagcagaacaagtagctaagaaaacagga
ttgctacaagaatttaagaaagatggtactcctgaggggattgctaagatggagaacatc
gaggagatgctaaatggtattaaggatttcgtagcagggcaagaggatatagccgatagc
acaggtagcttaacggagtatttagaagatgtatcgttagctactgattctgataaagag
ataggcgatgaagaccgtgtagccctaatgaccatacacttggctaaaggattggagttc
ccttatgtatatgtggtgggaatggaagaagaccttttccccttggctaagagtatacaa
tcgcgtgaggagttagaggaagagcgtcgcttattttacgttgcacttacccgcgccgag
aagcaggcctacctcacttatgcagagaatcgttaccgctggggacagctttcgccctct
gaacctagtaggtttatagaagagatagaagagaaatacttgagttacctcactcctact
ctatctaatcctaactatcgttataagcctttagtgaatagagatatatttggagaagta
gataagagtaagttacgcttgcagaaacctattagtggtacgcctcctgctaaaaacgct
cctacaggtgaagaacagcagaagctacgaaagctaaagcctatcaatgctatgcagaat
ctagcgagcaaagatgtttataatggtttagatataggcactaatgtctatcacgagcgt
tttggtaaaggtaaagtagtaggcttagaaggtagtgggaacgataaaaaagcacaaata
aactttgaggtgggaggtttaaaaaatattctactgcgatttgcaaagctaactatagta
aattag

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