Capnocytophaga leadbetteri: CGC53_00860
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Entry
CGC53_00860 CDS
T05313
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
clk
Capnocytophaga leadbetteri
Brite
KEGG Orthology (KO) [BR:
clk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
CGC53_00860
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Ortholog
Paralog
GFIT
Motif
Pfam:
Tex_YqgF
Tex_central_region
HHH_3
Tex_N
HHH_9
S1
HHH_7
YqgF
T2SSK
OB_PDCD11
HHH
ATP-synt_ab_C
Spt6_S1
HHH_2
S1_RRP5
HHH_5
HHH_6
Motif
Other DBs
NCBI-ProteinID:
ATA81007
UniProt:
A0A250FAF1
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All DBs
Position
187946..190069
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AA seq
707 aa
AA seq
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MTNILFIKNQTQLTERAIEHTLELLSEGCTIPFIARYRKDKTGNLDEVAIERIAKAQNEY
DNICKRKETILSSIEEQGKLTDELRKRIETSFELNELEDLYLPYKKRRKTKGDVAKENGL
EPLAKQIMAQRPADLSSLASRYLSDKVTTEAEALQGASDIIAEWINENMFIRRTLRKVFQ
RKALIVTEVAKGKADEEEAQKYSQYFDWNESLAKAPSHRVLAMLRAEKEGFIKMKVQVDT
EETLPFIEKNIIKSSGEIADFLQKTIKDSYKRLLEPSIANETLQEAKDKADNKAIAVFSE
NLSQLLLAAPLGEKRILAIDPGYRTGCKVVCLDEKGDLLHHDVIYPHAPQQDTATATKKL
RTMVAQYKIEAISIGNGTASRETEAFVKSVAFPQSIEIFVVSEAGASVYSASKIAREEFP
NEDVTVRGAVSIGRRLSDPLAELVKIDPKSIGVGQYQHDVNQTLLKEELDTTVMRCVNKV
GVNLNTASKSLLSYVSGIGDKMAENIVAYRSANGAFNKREALKKVPRLGDKVYQQAVAFL
RIKEGDNPLDNSAVHPEAYPIVHKMAKDLGLPTEKLIGNKQAIATIDIQKYISDEVGVLY
LKDVLKELEKPGLDPRQAAKAFAFDPNVKTFDDVRVGMVLPGIVNNITAFGCFVDIGLKE
SGLVHISQLKDGYVSDVNEVVKLHQQVEVKVTEVDEARHRISLSMIL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatattttatttataaaaaatcaaacacaactgacagaacgggctattgagcat
actctagaactgctttccgaaggctgtactattccttttatagctcgctatcgcaaagat
aaaactggtaatctggatgaggtggcaattgaacgtatcgctaaagctcagaacgaatat
gacaatatttgtaagcgcaaagaaaccatcttatcatcgatagaagaacaaggaaaactt
accgatgaactccgaaaacgtatagaaacttcttttgaactaaatgagttagaagacctt
tatttaccttataaaaaaagacgcaaaactaaaggtgatgtggctaaagaaaacggcttg
gagcctcttgccaaacagattatggcacaacgcccagctgacttgtcttcgcttgcctct
cgttacctatctgataaggtaactactgaagctgaagctctacaaggggcttcggatatt
atagctgaatggattaatgagaatatgtttatcaggcgtactcttaggaaagtttttcaa
cgcaaagccctcattgttactgaggtagccaagggaaaagctgatgaagaggaagctcaa
aaatactcacaatattttgattggaacgagtcattagccaaagccccttcgcatagagtg
ctggctatgctcagagctgaaaaagagggatttataaagatgaaagtacaagttgataca
gaagaaactttgcctttcatagaaaaaaacatcatcaagagtagcggagaaatagctgac
tttttgcagaaaaccataaaagatagttataaacgccttttagagccttcgattgccaat
gaaacgcttcaggaagctaaagataaggctgataacaaagcgatagcggtatttagtgag
aatttatcgcaactgttattggctgcccctttgggtgaaaagcggattttggctattgac
cccggttatcgaaccggctgcaaggtggtatgcttagatgaaaaaggcgacctactgcac
cacgatgttatttatcctcacgcgcctcagcaagatacagctactgctactaaaaagcta
cgcacaatggttgctcagtataaaatagaggccattagtataggtaatggtactgcttcg
cgcgagacagaagcctttgtaaaatcggtagcgtttcctcagtcaatagaaatatttgta
gtgagtgaagcaggagcatcggtatattcagcctctaagatagcacgagaggagttccct
aacgaagacgttactgtacgaggagctgtatctatcggtaggcgtctatcagaccctttg
gcagaattggtgaaaatagaccctaagagtataggtgtggggcaatatcagcacgatgtg
aaccaaacgctattgaaagaagagcttgacactactgtgatgcgctgtgtaaataaagta
ggtgttaatctgaataccgccagcaagtcgctgttgagctatgtgtcgggtataggtgac
aagatggcagaaaatatagtagcgtaccggtcggctaacggagccttcaacaaacgagaa
gccttgaaaaaagtaccgcgtttgggtgataaagtataccagcaagcagtagctttcttg
cgtatcaaagaaggagataatccgttagataattcggctgtacaccctgaagcctacccc
atagtacacaaaatggcaaaggatttgggattgcctacggagaaacttataggcaacaaa
caagctattgcaaccattgatattcagaaatatatcagtgatgaagtgggggtattatat
ctgaaagatgtattaaaagaacttgagaaaccgggtcttgaccctcgacaggctgctaaa
gcttttgcttttgaccctaatgtaaagacttttgatgatgtaagggtaggaatggtattg
ccagggatagtgaataacatcaccgcttttggttgctttgtggatataggactgaaagag
agtggtttagtacatatttcgcaactgaaagacggttatgtatctgatgtaaatgaagta
gtaaaactccaccaacaagtagaggtaaaggtgacggaagtagatgaggcaaggcatcgg
atatcgctttcaatgatactttaa
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