Capnocytophaga leadbetteri: CGC53_02725
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Entry
CGC53_02725 CDS
T05313
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
clk
Capnocytophaga leadbetteri
Pathway
clk00521
Streptomycin biosynthesis
clk00523
Polyketide sugar unit biosynthesis
clk00525
Acarbose and validamycin biosynthesis
clk00541
Biosynthesis of various nucleotide sugars
clk01100
Metabolic pathways
clk01110
Biosynthesis of secondary metabolites
clk01250
Biosynthesis of nucleotide sugars
Module
clk_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
clk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CGC53_02725 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CGC53_02725 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CGC53_02725 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CGC53_02725 (rfbB)
00525 Acarbose and validamycin biosynthesis
CGC53_02725 (rfbB)
Enzymes [BR:
clk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CGC53_02725 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
adh_short
NmrA
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ATA81341
UniProt:
A0A250F8A1
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All DBs
Position
complement(634978..635973)
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AA seq
331 aa
AA seq
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MKRNLLITGGAGFIGSHVVRLFVTKYPGYHIFNLDKLTYAGNLDNVADVANAPNYTFIEA
DICDYERMKELFKKYHIDGVIHLAAESHVDRSIEDPFIFAKTNVMGTLSLLQAAREAWKD
NMQGKRFYHVSTDEVYGALEMDNTLFTEETPYDPQSPYSASKASSDHFVRAYYNTYKLPV
VISNCSNNYGSHQYPEKLIPVCIYNIVDNKPLPIYGKGENIRDWLFVEDHARAIDVIFHQ
GKDGDTYNIGGFNEWRNIDLVRVIIKEVDKQLGRPEGTSEKLITFVTDRAGHDLRYAIDA
TKLKNELDWEPSLQFEEGIQKTVKWYLERIK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaacctcttaattacaggaggagctggttttatcggctcgcacgtggtgagg
ttatttgtaactaaataccctggttatcacattttcaacttagataaacttacttacgca
ggcaatttggataacgttgctgatgtagccaatgcccctaattatactttcatagaggct
gatatttgcgactatgagcgtatgaaggagctttttaagaagtatcatattgatggggtg
atacaccttgctgctgaaagtcacgtggataggagtattgaagaccctttcatctttgct
aaaactaacgtgatgggtactttgagcctcttgcaggcggctcgcgaagcgtggaaggac
aatatgcagggcaaacgcttctatcacgtctctactgacgaggtgtatggagcgttagaa
atggataacacactctttactgaagaaactccatacgaccctcagtcgccgtattcagct
tctaaagcctcatcagatcactttgtgagggcttactacaatacttataagctacctgtg
gtgatttctaattgttctaacaattatggttctcatcaatatcctgagaagcttattccc
gtatgtatttacaatatagtagataataagcccctacctatttacggcaaaggcgagaat
attcgcgattggttgtttgtagaagatcacgctcgtgctattgatgttatttttcatcag
gggaaagatggtgatacttacaatattggtggttttaacgaatggcgtaatatcgactta
gtaagagtgattattaaagaagttgataagcaattaggaagacccgaaggcacttcagag
aagcttattacctttgtaactgaccgtgctggtcacgatttgcgttatgctattgatgct
actaagctgaagaatgagctggattgggaaccctcattgcagtttgaagaaggtatacaa
aaaactgtaaaatggtatcttgagagaattaaataa
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