Capnocytophaga leadbetteri: CGC53_03010
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Entry
CGC53_03010 CDS
T05313
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
clk
Capnocytophaga leadbetteri
Brite
KEGG Orthology (KO) [BR:
clk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clk03032
]
CGC53_03010 (gyrB)
03400 DNA repair and recombination proteins [BR:
clk03400
]
CGC53_03010 (gyrB)
Enzymes [BR:
clk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CGC53_03010 (gyrB)
DNA replication proteins [BR:
clk03032
]
Prokaryotic type
DNA Topoisomerases
CGC53_03010 (gyrB)
DNA repair and recombination proteins [BR:
clk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CGC53_03010 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ATA81390
UniProt:
A0A250F8E0
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Position
complement(703536..705509)
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AA seq
657 aa
AA seq
DB search
MAEEVYNEQNTADYSADNIQSLEGMEHVRMRPSMYIGDVGVRGLHHLVYEVLDNSIDEAL
AGYCDMIAVTINEDNSITVEDNGRGIPVDIHKKEGVSALQVVMTKIGAGGKFDKGSYKVS
GGLHGVGVSCVNALSNHLTATVYRDGKIWQQEYERGVALYPVKQLGDTDKRGTKVTFLPD
DTIFEQTTEYKYDTLAARIRELAYLNKGITVTLTDLRNKDEKGNYIHEKFHSEKGLTEFV
KYLDGNRIPIIGGVIAMEGEKNGIPVEVAMTYNDSYTENLHSYVNNINTSEGGTHLQGFR
MGLTRTLKAYADKSGLLEKMSKDKKNPVEIEGDDFREGLTAVISVKVAEPQFEGQTKTKL
GNREVTSAVSQAVGQMLEDYLEENPNDAKTIVEKVILAAQARQAARKAREMVQRKSVMSG
GGLPGKLADCSEEDPKKCELFLVEGDSAGGTAKQGRNKDIQAILPLRGKILNVEKAMQHK
VFDSDEIKNIYTALGVSVGTEEDAKALNLSKLRYHKVIIMCDADVDGSHITTLILTFFFR
YMRELIENEHVYIATPPLYLVKSKTSKRQEYAWSDKQRDALSAEMGNVTIQRYKGLGEMN
DHQLWDTTMDPAHRTLRKVTIDNASEADRVFSMLMGDEVPPRREFIEKNAKYAKIDA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaagtatataacgaacaaaataccgctgactattcagctgataatatccaa
tctctcgaaggtatggagcacgtgcgtatgcgcccctctatgtatataggcgacgtgggc
gtgcgcggtttgcatcaccttgtgtatgaagtgcttgacaactcgatagacgaggcgctg
gcgggctattgcgatatgatagccgttactattaacgaggataactctatcaccgtagag
gataatgggcgtggtatccctgtggatattcacaagaaagaaggcgtttcggcactacaa
gtggtaatgaccaaaattggtgccggtggtaagttcgacaaaggctcttataaagtgtct
ggtggtttgcacggggtaggggtatcgtgcgtgaatgccctttctaatcacttgactgct
accgtatatcgcgatggtaagatatggcaacaagagtacgaacgcggggtggctctctat
ccagtaaaacaattgggtgacactgataagcgcggtactaaggttactttcttgcctgat
gatactatttttgagcaaactactgagtataaatacgatactcttgccgcacgtattcgc
gagttggcttatttgaacaagggtatcaccgttacacttactgacctaagaaataaagac
gaaaaaggtaactatatacacgagaaatttcattctgaaaaaggacttactgagtttgtg
aaatatcttgatggcaaccgtattcctatcattgggggcgtgattgctatggaaggtgag
aaaaacggtataccggtagaggttgcgatgacttacaacgattcgtatactgaaaacttg
cattcttacgttaataatattaacacctcagaagggggtacccatttgcagggcttccgt
atggggcttactcgtacccttaaagcgtacgctgataagtcgggattgctcgaaaaaatg
agcaaggataagaaaaatcctgtagaaatagagggtgatgacttccgtgaggggcttaca
gcggttatctcggtaaaagtggctgaacctcagtttgaggggcaaaccaagactaagttg
ggtaaccgtgaggtgacttcggcagtatcgcaagcggtaggtcagatgcttgaggattac
ttagaagagaatcctaatgatgctaagacgatagtagagaaagtgatactcgctgcgcaa
gcccgtcaggcagcccgtaaggctcgtgagatggtacagcgcaagagtgtgatgagtggc
ggcggcttgccagggaaattggctgactgttcggaagaagaccctaagaagtgtgagctc
ttccttgtagagggggactctgcggggggtaccgctaagcaaggtcgcaataaggatata
caggctattctgcccctacgtggtaagatattgaacgtagaaaaagcgatgcagcacaag
gtgttcgacagcgatgagataaagaatatttatactgctttgggggtaagcgtaggtact
gaagaagatgctaaagctctgaaccttagtaagctgcgttatcacaaagtgattattatg
tgtgatgccgatgtagacggttcgcacattactacgctgatacttaccttcttcttccgc
tatatgcgcgaactgatagaaaacgagcacgtatatattgctacgcctccgctttacttg
gtgaaaagcaagactagcaagcgccaagagtatgcgtggagcgataagcaacgcgatgcg
ctttcagctgaaatgggcaatgtgactattcagcgttataaaggtttgggtgagatgaac
gaccaccagctgtgggatactactatggaccctgctcaccgtactttgcgcaaagttact
attgataatgcttcggaagctgaccgtgtgttctcgatgttaatgggtgatgaggtacca
ccacgccgtgagtttatcgagaaaaatgctaaatacgctaagatagatgcgtag
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