Capnocytophaga leadbetteri: CGC53_03665
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Entry
CGC53_03665 CDS
T05313
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
clk
Capnocytophaga leadbetteri
Pathway
clk03030
DNA replication
clk03430
Mismatch repair
clk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC53_03665 (holA)
03430 Mismatch repair
CGC53_03665 (holA)
03440 Homologous recombination
CGC53_03665 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clk03032
]
CGC53_03665 (holA)
03400 DNA repair and recombination proteins [BR:
clk03400
]
CGC53_03665 (holA)
Enzymes [BR:
clk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC53_03665 (holA)
DNA replication proteins [BR:
clk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC53_03665 (holA)
DNA repair and recombination proteins [BR:
clk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC53_03665 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta2
DNA_pol3_delta_C
Ribosomal_S15
TnpB_IS66
Motif
Other DBs
NCBI-ProteinID:
ATA81507
UniProt:
A0A250FBV9
LinkDB
All DBs
Position
846614..847627
Genome browser
AA seq
337 aa
AA seq
DB search
MEEVKKIIANIKKGIIAPIYFLMGEEPYFIDVVANYLEKHLLEEDQKGFDQLVLYGQDVT
VPTIIDYARRFPMMAERQLIIIKEAQNLRASIDQLVPYVENPTASTVLVFCYKYEKLDAR
KKLLKSLGKNQDCVVMESKKLYENQVISSFLPDVMKKKHLSIQPKATQMLVDFLGNDLSR
IENEVNKLALIVPANTEVTPDIIEKNIGISKEFNNFELKSAFATNDKVKIARIIKHFAEN
PKDNPLVVTLTVLYGFFQKLLIYHSLTDVSDKNVMAATKATFFDVKDLRSAAQHYPMKKV
SAIMAGLREIDVKSKGVGAASTTPADLLKELMMVING
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtaaaaaaaattattgctaatataaagaaaggaattattgcccccatttat
ttcttgatgggcgaggaaccttatttcatagacgtagtagctaactacttagaaaagcac
cttttggaagaagaccagaaggggtttgaccagttagtactatacgggcaagacgtgacg
gtgcctacaattatagactatgcacgccgcttcccgatgatggcagagcgccaattgatt
atcattaaagaagcgcagaaccttagggctagtattgaccaattagtaccttatgttgaa
aatcctaccgcctctaccgtgctagtattttgctataaatacgagaagttagacgcacgc
aagaaactactaaagagtttagggaaaaaccaagattgtgtggtaatggaaagcaaaaag
ttatatgaaaaccaagtaataagcagctttttgccagatgttatgaagaagaagcacctt
agcatacagcctaaagctactcagatgttagttgatttcttaggaaatgacctcagccgc
attgaaaatgaagtaaataaattagctcttatcgtacctgcaaacaccgaagtaactccg
gatattatagagaagaatataggcattagcaaagagtttaacaacttcgagctgaaaagc
gcttttgccactaatgataaggtgaaaatagcgcgtattattaagcattttgctgaaaac
cctaaagataatcctttggtggtgacgctcactgtactatacggattctttcagaagcta
ttaatttatcatagcctaactgatgtgagcgataaaaatgtaatggcggctactaaagct
accttttttgatgtaaaagatctgcgtagtgctgcccaacattacccgatgaagaaagtg
agtgctataatggcgggcttgcgagagatagatgtgaagagcaaaggcgtaggggctgcg
agtactacccctgctgacctactaaaagaactgatgatggttattaatggttaa
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