Capnocytophaga leadbetteri: CGC53_05325
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Entry
CGC53_05325 CDS
T05313
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
clk
Capnocytophaga leadbetteri
Pathway
clk03030
DNA replication
clk03410
Base excision repair
clk03420
Nucleotide excision repair
clk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC53_05325
03410 Base excision repair
CGC53_05325
03420 Nucleotide excision repair
CGC53_05325
03440 Homologous recombination
CGC53_05325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clk03032
]
CGC53_05325
03400 DNA repair and recombination proteins [BR:
clk03400
]
CGC53_05325
Enzymes [BR:
clk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC53_05325
DNA replication proteins [BR:
clk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CGC53_05325
DNA repair and recombination proteins [BR:
clk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CGC53_05325
NER (nucleotide excision repair)
GGR (global genome repair) factors
CGC53_05325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
Pro-kuma_activ
NYN_YacP
HHH
ANAPC10
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
ATA81808
UniProt:
A0A250FCQ1
LinkDB
All DBs
Position
complement(1179580..1182369)
Genome browser
AA seq
929 aa
AA seq
DB search
MKKRLFLLDAYALIFRGYYAFIKNPRINSKGLNTSAILGFMNSLFDVMKKERPHHLAVAF
DKGGSVARTELFADYKANREETPEAIRIAIPYIHQILNALHIPIIEKEGYEADDIIGTLA
KQAEKQDYQVYMVTPDKDYAQLVSDNIFMYRPPRGGNDIEIWGVKEVQEKFEVQNPLQVI
DFLGMMGDAVDNIPGLPGVGEKTAKKLLADFGSLENLLANTDQLKGKLRENIENNKEKGI
LSKQLATIMLDVPVVFDEKDCEVSTPDFEAVGKLFEELEFRQLLVNFQKVYQPEAVVQNN
QKAASAQLDMFAVQGDLFAQPQVAVEKKTAANTPHYYQLADTPMAQQLLLQSLLQQTEVC
FDTETTAIDALEAELVGISFCWTAHKGYYVPFPVDKEEATALLNTFRPFFENEKITKVGQ
NLKYDLKVLQNYGIKVQGALFDTMIAHYLINPDMRHNMDLLSETYLGYTPIAIESLIGKG
KAQRSMRTVALEEVKEYAVEDADVTWQLKDVFKAELPKVNAQKVYADLEMPLLKVLAAME
REGVTLDVAYLKEYSKTLDAEIAQLEATIAEQAGTPFNLASPKQLGDILFEKLEIDSKPK
KTKTGQYATSEEVLAPFAAKHKIVADILEWRQVQKLKSTYVDALPLEVNPRTGRVHTTYM
QTVAATGRLSSNNPNLQNIPIRTERGQRVRKAFIARNNDYVLLSADYSQIELRIIAALSE
EHNMIESFLHGEDIHRATAAKVFNVPLEAVTREQRSHAKTVNFGIIYGVSAFGLSAQTDL
SRSQSKELIDTYYATYPNLRNYIQKQIHFAQEHGYVETVLGRRRYLPDIHSRNQVVRGAA
ERNAVNAPIQGSAADIIKIAMIRIYDLLQAQQLQTRMLLQVHDELVFDVPKTELEIVKPL
IKEAMESAFTLAVPLVADLGIGNNWLDAH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacgcctatttttactcgatgcctacgcccttatttttaggggctactacgct
tttattaaaaacccgcgcatcaattccaaaggactgaacacttcagccattttgggcttt
atgaactcccttttcgatgtgatgaaaaaggagcgacctcatcatttagccgtagcattc
gataagggcggtagtgtagcgcgcaccgagctctttgccgattataaagctaaccgcgaa
gaaacccctgaggctatccgcatagccattccttatatacatcagattctcaatgccttg
catatccctattatcgaaaaagagggttatgaggccgacgatattatcggtacgcttgcc
aagcaggccgaaaaacaagattatcaggtctatatggttacccccgataaagattacgca
cagttggtgagcgacaatatctttatgtatcgcccccctcgcggaggaaacgatatagaa
atatggggggtgaaagaggtacaagagaaattcgaggtacaaaaccccttgcaagtgata
gactttctgggtatgatgggcgatgcggttgataatatccctggcctccctggggtaggc
gagaagactgccaaaaagctccttgccgactttggttctttagaaaacctccttgctaat
accgaccagcttaaaggtaagctgcgcgagaatatagagaataataaagaaaaaggtatc
ctctctaagcagttggctaccattatgcttgatgtgccagtcgtttttgatgagaaggac
tgcgaagtctctactcccgacttcgaggcggtaggcaaactctttgaagagttagaattt
cgtcagttattagtcaattttcaaaaggtatatcagccagaagcggtagtacaaaacaat
cagaaggccgcttcagctcagttagatatgtttgccgtacaaggcgacttatttgctcag
ccccaagtagcggtcgagaagaagacagccgccaataccccccattactaccagttggca
gataccccaatggcacaacaattactgctacaatcgctattgcagcaaacagaagtctgt
tttgataccgaaacaaccgctattgacgctcttgaagctgaattagtaggtatttccttc
tgttggacggcacacaaaggctattatgtaccatttcctgtagataaagaagaagctaca
gcgctactcaatacttttcgtccgttttttgagaatgaaaagataaccaaagtaggtcag
aatttaaaatacgaccttaaagtactccaaaattacggcataaaggtacaaggggcgcta
ttcgatacgatgatagcccactaccttatcaaccccgatatgcgccataatatggacttg
ctttcggaaacctatttgggctatacccctattgctatcgaaagtcttataggcaaaggc
aaggcgcaacgctcgatgcgtaccgtagctttggaagaggtgaaagagtatgcggtagaa
gatgctgacgttacttggcaactaaaggacgtttttaaggcagaattgcctaaggtaaat
gcccaaaaagtatatgccgatttagagatgcccctgctgaaagtattagcggcaatggag
cgcgagggggtaacccttgatgtggcgtatctgaaagaatattctaaaaccttagatgct
gagatagcacaattagaagccactatagccgagcaagcaggtacgccttttaatttggca
tcgcccaaacagttaggcgatattctcttcgagaaactcgagatagacagcaagcctaag
aagacaaaaacggggcaatatgctacttccgaagaggtcttggctccttttgctgccaaa
cacaagatagtagccgatatattagagtggcgacaagtgcagaagctcaaatctacttat
gtagatgctttgccgttagaggtgaacccccgcacagggcgtgtgcatactacctatatg
cagacggtagccgctacggggcgccttagtagcaataatcctaacctgcagaatatccct
atccgtaccgagcgtgggcaacgagtgcgcaaggcattcatagctcgcaataacgattat
gtactcctctcggccgactattcgcaaattgagttgcgcatcattgcagccttaagcgaa
gagcataatatgatagaatctttcttgcacggcgaggacattcaccgcgctacggcagcc
aaagtgtttaatgtacctttagaggcggttactcgcgagcaacgcagtcacgccaaaacg
gtaaacttcggtattatctatggcgtatcagcttttggtctttcggcacaaaccgatttg
agcaggtcgcagagcaaggagctgatagatacctattacgctacttaccccaatctccgc
aactacatacagaagcagatacactttgcccaagagcacggctatgtagagactgtactt
ggcaggcgtcgctacctgcctgatatacattcgcgcaatcaagtagtgcgaggggcagca
gagcgcaacgcggtaaatgcgcctatacaagggtcggcagccgatattatcaagatagcg
atgatacgtatttacgacctactgcaagcccagcaattgcaaacccgtatgctgctgcaa
gtacacgatgagttagtattcgatgtgcctaaaaccgaattagagatagtgaaacctctg
ataaaagaagcaatggaaagtgcctttactcttgccgttccgttagtcgctgatttaggc
atagggaacaactggctcgatgcgcattaa
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