Capnocytophaga leadbetteri: CGC53_06745
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Entry
CGC53_06745 CDS
T05313
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
clk
Capnocytophaga leadbetteri
Brite
KEGG Orthology (KO) [BR:
clk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clk03009
]
CGC53_06745 (rimO)
Enzymes [BR:
clk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CGC53_06745 (rimO)
Ribosome biogenesis [BR:
clk03009
]
Prokaryotic type
ribosomal protein modification factors
CGC53_06745 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ATA82061
UniProt:
A0A250FAA8
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All DBs
Position
complement(1484202..1485506)
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AA seq
434 aa
AA seq
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MRTRSIKKNTINVVTLGCSKNVYDSEVLMGQLKAGGKNVVHEQEGNIVVINTCGFINNAK
EESINTILEYVQQKEAGLIDKVFVMGCLSERYKPDLEKEIPDVDQYFGTSELPALLKVLG
ADYKHELIGERLTTTPKNYAYLKISEGCDRPCSFCAIPLMRGAHISTPIEALVTEAEKLA
AKGVKELILIAQDITYYGLDLYKKRALADLLRALVKVEGIEWIRIHYAFPTGFPMDVIEV
MKEEPKICNYLDIPLQHISDPILASMKRGTTQEKTSKLLKKFREAMPEMAIRTTLIVGYP
GETQADFEALKSFVKEMRFDRLGCFTYSHEENTTAYELEDDVPEEVKLARANEIMEIQSQ
ISWELNQEKIGKTFRCLIDRKEGNYFVGRTEYDSPDVDNEVLIDAKKHYVKIGDFVEVKI
IDATDYDLYGEPVR
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacaagaagtataaagaaaaacactataaacgtagtaacccttggttgctctaag
aacgtatacgacagcgaagtccttatggggcaactcaaagctggcggcaaaaatgtagtt
cacgaacaggagggtaatatcgtggttatcaacacctgcggctttatcaataacgccaaa
gaagagagcatcaacaccattttagagtatgtgcagcagaaagaagcgggcttgatagac
aaggtgttcgtaatgggctgcctttcagagcgctacaaacccgatttagaaaaagaaata
cccgatgtcgaccagtatttcggcactagcgaactgccagccctgctaaaagtattgggg
gcggactataagcacgaactcataggcgaacgcctcaccactacccctaaaaattacgct
tatctcaaaatatctgagggctgcgaccgcccgtgtagtttctgtgctatcccactgatg
cggggcgctcacatttccacccctatcgaggcgcttgtcaccgaagccgaaaagctcgct
gccaaaggcgttaaagagttgatactcatcgctcaagatattacctactacggacttgac
ctctacaaaaaacgcgcccttgccgacctgcttcgcgccctcgtaaaagtcgaaggcatc
gagtggatacgcatacactacgcctttcctactggcttccctatggacgtcatagaggtg
atgaaagaagagcctaaaatatgcaattacttagacatacccttgcagcacatttccgac
cctattttagcgagtatgaagcgcggcactacccaagagaaaacctctaaactgctgaag
aaattccgcgaggcgatgcccgaaatggcaatacgcactacccttatagtaggttaccca
ggcgaaacccaagccgacttcgaggcgctcaaatcttttgtgaaagaaatgcgttttgac
cgtttaggttgcttcacttacagtcacgaagagaataccaccgcctacgaacttgaagac
gatgtacccgaagaggtaaaactcgctcgtgccaacgagataatggagatacagtcgcaa
atatcgtgggaactcaaccaagaaaagataggcaagactttccgttgtctgattgaccgc
aaagagggcaattattttgtagggcgtaccgaatatgactcccccgatgtcgacaatgag
gtacttattgatgccaaaaaacactacgtaaaaataggcgattttgtagaagtaaaaatc
atagatgccaccgattacgacctctacggcgaacctgttaggtaa
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