Capnocytophaga leadbetteri: CGC53_08760
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Entry
CGC53_08760 CDS
T05313
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
clk
Capnocytophaga leadbetteri
Pathway
clk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGC53_08760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clk03019
]
CGC53_08760
03016 Transfer RNA biogenesis [BR:
clk03016
]
CGC53_08760
Enzymes [BR:
clk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CGC53_08760
Messenger RNA biogenesis [BR:
clk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CGC53_08760
Transfer RNA biogenesis [BR:
clk03016
]
Prokaryotic type
tRNA degradation factors
CGC53_08760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Impact_N
Motif
Other DBs
NCBI-ProteinID:
ATA82426
UniProt:
A0A250FEJ4
LinkDB
All DBs
Position
complement(1959695..1961938)
Genome browser
AA seq
747 aa
AA seq
DB search
MIPEVKKEIIDLGDGRTITIETGKLAKQADGAVVVQMGNAMLLATVVSARDINPETDFLP
LTVDYREKFAAAGRFPGGFFKREARPSDQEILTMRLVDRVLRPLFPKDYHAETQVMIQLI
SHDENVMPDALAGLAASACLAVSDIPFDGPISEVRVGRVNGKFIVNPSREQLEASDIDIM
VGASKDFVAMVEGEMNEVSEKDMAEAIKFAHEAIKPHIEAQLRLAEKVGKTEKRTYEPEV
ENEEVKAKVYPLAYEKCYAIAKENTTKQERGEKFNAVKEECLALFTEEELEELTPLITRY
FGDAEKEAVRNLILEENIRLDGRNTTQIRPIWCEVGYLPSAHGSSIFTRGETQSLTTVTL
GTSREANVIDLPSEQGEERFYLHYNFPPFSTGEARPLRGTSRREIGHGNLAQRALKRMIP
EDCPYTVRVVSEILESNGSSSMATVCAGTLALMDAGVQMVKPVSGIAMGLISDGDRYAVL
SDILGDEDHLGDMDFKVTGTADGITACQMDIKIKGLSYEILEKALNQAREGRMHILGKIT
DTIAQPNPTVKPHAPKIVKMDMPKEFIGAFIGTGGKNIQDLQARTKTTIVVEEVGELGIV
EILGTDEAGIQEAIEAVNAVKFEPVEGETYTVKVVRLVEFGAFVEFVPGKDSLLHISEVS
WDRVDKIEDVLKEGDIIEVKYLGIDPKTKKTRVSRKALLPRPPREERPDRPAREDRPKSD
KPYNGKPRGDRNDRPKGHNNNQKPRQE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgataccagaagtaaaaaaagaaattatcgatttaggtgatggtcgtaccattactatc
gaaactggcaagctagctaaacaagctgacggtgctgtggtggtgcaaatgggcaatgct
atgctattggcaacagtagtatcagcaagagatataaaccctgaaaccgattttctaccc
ctaacggtagactatcgcgagaagtttgcggcagcaggtcgtttccctggtggctttttc
aaacgcgaagcacgccccagcgaccaagaaatcttaacaatgcgcttggtagaccgcgta
ttgcgtccgctcttccctaaagattatcacgctgaaacccaagtgatgatacagcttatc
tctcacgatgaaaacgtaatgcctgatgcgttagcaggtcttgctgcctcagcgtgtttg
gcagtatcagatataccattcgacggacctatctctgaagtgcgtgtaggacgtgtgaat
ggcaaattcatagtaaaccctagtcgcgagcagttagaagcatcagacatcgatattatg
gtgggagcttcaaaagacttcgtagcgatggtagaaggcgaaatgaacgaggtgagcgaa
aaagatatggctgaagctatcaagtttgctcacgaggctatcaaaccacatatcgaagcg
caattgcgtttggctgaaaaagtaggtaagactgaaaaacgcacctatgaacctgaagta
gaaaatgaagaagtaaaagcaaaagtatacccattagcttatgaaaaatgctatgctatt
gctaaagaaaatactactaaacaagaacgtggagaaaagttcaatgcggtgaaagaagag
tgcttagcactttttaccgaagaggaattggaagagctaactcctcttattactcgttat
tttggggatgcagaaaaagaggctgttcgtaaccttatcttagaggaaaatattcgttta
gacggacgtaatactacccaaatacgccctatctggtgcgaagtaggctatttgccttca
gcgcatggttcatctatctttacacgtggcgaaacccaatcgcttactaccgttacctta
ggtacttcacgcgaagcaaacgttatcgacctaccttcagaacaaggtgaagagcgtttc
tacctacattacaatttccctccattctcaaccggtgaggctcgccctttgcgtggtact
tcacgtcgcgagataggacacggaaacttagcacaacgcgcccttaaacgtatgatacca
gaggattgtccttatacagtacgtgtagtatctgagattttagaatctaatggttcatca
tcaatggctactgtgtgtgcaggtactttagcactaatggatgcaggggtacaaatggta
aaaccggtatcgggtattgctatggggcttatcagcgacggcgatcgttatgcggtactt
tcagacatcttgggcgatgaagaccacttaggcgatatggactttaaagtgactggtact
gctgatggtatcactgcttgccaaatggacatcaagataaaaggtctttcatatgaaatc
ctcgaaaaagcccttaaccaagcacgtgagggacgtatgcacattttgggcaaaataact
gacactatagcacaacctaatcctactgtgaagcctcacgctcctaagattgtgaagatg
gatatgcctaaagaatttattggagcatttatcggaactggaggtaagaatattcaagac
ctacaagctcgtactaaaactaccattgtggtggaagaagtgggcgaattgggtatcgta
gaaatcttaggtactgacgaagcaggtatacaagaagctatagaagctgtaaatgcagtg
aaatttgaacctgtagaaggtgaaacttacactgtgaaagtagtacgtttagtagagttt
ggggctttcgtagagtttgtacctggtaaagactctttgctccacatctcagaagtatct
tgggacagagtagataaaatagaagatgttcttaaagaaggtgatatcatagaagtaaaa
tacctcggtattgaccctaaaaccaagaaaacaagagtatcgcgtaaagctttattgcca
cgtccaccacgtgaagagcgtcctgatcgtccagcgagagaagaccgtcctaagtcagac
aagccttataacgggaaacctcgcggtgaccgcaatgaccgtcctaaaggacacaacaat
aaccaaaaaccacgtcaggaatag
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