Capnocytophaga leadbetteri: CGC53_09775
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Entry
CGC53_09775 CDS
T05313
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
clk
Capnocytophaga leadbetteri
Brite
KEGG Orthology (KO) [BR:
clk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clk03016
]
CGC53_09775 (truB)
Enzymes [BR:
clk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CGC53_09775 (truB)
Transfer RNA biogenesis [BR:
clk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CGC53_09775 (truB)
Prokaryotic type
CGC53_09775 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TonB_C
Motif
Other DBs
NCBI-ProteinID:
ATA82606
UniProt:
A0A250FF29
LinkDB
All DBs
Position
complement(2208094..2209680)
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AA seq
528 aa
AA seq
DB search
MITAQEFSEGKILLIDKPLQWSSFQAVNKIKWAILKHYKLKKIKIGHAGTLDPLASGLLV
ICTGKYTKKITEIQDAPKTYTGTITLGASTPSFDMETEVDAHYPTDHITPALIEQVRQQF
LGEQVQVPPVFSAIKKDGKRLYEFAREGEAIEVPSRQVFIYKFDIDTTDFPLLHFEVQCS
KGTYIRSLANDFGRALQSAGYLSALRRTQIGDYTVAEALTPDDFVATHIPDLRKPIILTT
IIEQFPLQKSVNDVYGEHRRQHTKPTKKAIDVRAILGRNEKKKNSAISREFRAFARMFTP
TDKAISLTLLVLFVTVITLLALQLNGQPKEIMIEVTTTPEEVITPLLPDTPLPMATDEAA
TAKTTLTTNAYNQADPQLKHSADIKTLDEIMAERTAQEMASLKEALVTGNTPTDLTVVPQ
PSQQPNTSLAIADKANKHTLVKYALAGRNGTIPNPVFTCEQDGQVVVIITVNEAGRVTKT
AIDKQASTTTDDCLIENSLRYALQAKFDAAPNKKEQIGTITYIFQKKR
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgattacagcacaagaattttcagaaggtaagatattgctcatagataaacccctgcaa
tggtcatcatttcaggcggtaaacaaaataaaatgggcaatactcaagcactataaacta
aagaaaataaaaatagggcacgcaggtactttagacccgcttgcctctggcttattggta
atatgtactggcaaatatactaagaaaataaccgaaatacaagacgctcctaaaacctat
actggtactatcactctgggggcttctaccccttcatttgatatggaaaccgaagtagat
gcccactaccctactgaccatatcaccccagctctcatagaacaagtaagacaacagttt
ttaggcgaacaagtgcaagtgccccccgtgttttcagctatcaaaaaagacggcaagcgt
ttatatgagtttgctcgtgaaggagaagctatagaagtaccttctcgccaagtattcatc
tacaagttcgacatagacactactgattttcctctattacattttgaagtacaatgcagc
aagggcacctatatacgctctttagctaatgattttggcagagcgctacaatcagcaggt
tatctgtcagctctcagacgcacccaaataggcgactatactgtagcagaagctcttacc
cccgatgattttgtagcaacccatataccagaccttagaaagccgattatcctaactact
atcatcgagcaattccccttgcaaaaatcggtgaatgatgtatatggagaacatcgcaga
cagcacaccaaacctactaaaaaagctatagatgtaagagccattctgggaagaaacgaa
aagaaaaaaaacagtgctatcagtagagagtttagggcttttgctcgtatgtttacccct
accgataaggctatctcgcttaccttgcttgtgctctttgttacagtcattaccctattg
gctctacaactcaacgggcagcctaaagagataatgatagaggtaacaaccactcctgaa
gaggttatcactcctctcctacccgatactcctcttcctatggccactgatgaagctgct
acagctaagaccactctcactaccaacgcctacaaccaagctgacccacaactaaagcat
agtgctgacatcaaaacattagatgagataatggcagaacgcaccgctcaagagatggca
agcctcaaagaggctttagtaacaggcaatacacctaccgacttgacagtagtaccacag
ccatcgcaacagcctaatacttctcttgctatagctgataaagctaacaaacatacctta
gtgaaatatgctcttgcaggtagaaacggcactatacctaatcctgtatttacctgcgag
caagacggacaagtggtagtcatcatcacggtgaacgaagctggacgagtaactaagact
gctattgataaacaagcctctactaccaccgatgattgcttaatagaaaactcattgcgc
tatgctcttcaggctaaatttgacgcagcccctaataagaaagaacaaataggaactatt
acttacatatttcaaaaaaagagatga
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