Capnocytophaga leadbetteri: CGC53_10320
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Entry
CGC53_10320 CDS
T05313
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
clk
Capnocytophaga leadbetteri
Pathway
clk03030
DNA replication
clk03430
Mismatch repair
clk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC53_10320
03430 Mismatch repair
CGC53_10320
03440 Homologous recombination
CGC53_10320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clk03032
]
CGC53_10320
03400 DNA repair and recombination proteins [BR:
clk03400
]
CGC53_10320
Enzymes [BR:
clk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC53_10320
DNA replication proteins [BR:
clk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC53_10320
DNA repair and recombination proteins [BR:
clk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC53_10320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
DNA_pol_B_exo1
Motif
Other DBs
NCBI-ProteinID:
ATA82707
UniProt:
A0A250FFB1
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All DBs
Position
2317653..2318429
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AA seq
258 aa
AA seq
DB search
MELKLSKPICFFDLETTGIDITKDRIVEISILKVYPNGNKESKTWLVNPTIPIPAMASAV
HGITDEKVANEPTFKELAKQIHNMIKDSDLAGYNSDRFDIPLLAEEMLRAGVDFDLGNRV
TVDVQTIFHKMEQRTLSAAYKFYCGKDLLEAHTAAADTNATYEILKAQLDKYEDLENNIK
KLSEFTYRKQIADFAGFIGYNSEGEEIFTFGKHKGSKVEDIFVNEPGYFGWLLNADFPLY
TKKVLTAIKLRKLSSTIK
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtggaactaaaattatcaaaacctatctgttttttcgatttggaaacaacaggcattgac
attactaaagatcgtattgtagaaatttcgatattgaaagtatatcctaatggtaataaa
gaaagcaaaacgtggttggtaaatcctacgattcctattcctgcaatggcttcggcagta
cacggcatcactgatgagaaagtggctaatgagcctacttttaaagaattggctaagcaa
atacacaatatgataaaggattcagacttagcaggttataattcagaccggtttgatatt
ccgttattggcagaagagatgctacgtgcaggagtagattttgaccttggcaatcgtgtg
acggtagatgtacaaacgatatttcacaaaatggaacaacgcaccttgtcggcagcttat
aaattctattgcggtaaagacctgcttgaggcacatactgctgctgctgatactaatgct
acctatgaaatactgaaagctcagctggataagtatgaagacttagagaataacatcaaa
aagctaagtgagtttacctaccgaaaacagatagctgattttgctggatttataggctat
aacagcgaaggagaggaaatatttacttttggaaaacacaaaggtagtaaagtagaggat
atttttgtgaatgaaccaggatattttggttggctattgaacgctgattttcctttatat
accaaaaaagtactgacggctatcaagctgcgcaaactatcctctaccataaaatag
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