Capnocytophaga leadbetteri: CGC53_10420
Help
Entry
CGC53_10420 CDS
T05313
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
clk
Capnocytophaga leadbetteri
Pathway
clk00541
Biosynthesis of various nucleotide sugars
clk01100
Metabolic pathways
clk01250
Biosynthesis of nucleotide sugars
Module
clk_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
clk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CGC53_10420
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
clk01005
]
CGC53_10420
Enzymes [BR:
clk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
CGC53_10420
Lipopolysaccharide biosynthesis proteins [BR:
clk01005
]
Lipid A
CGC53_10420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
DUF5091
Motif
Other DBs
NCBI-ProteinID:
ATA82726
UniProt:
A0A250FFF9
LinkDB
All DBs
Position
complement(2343024..2343815)
Genome browser
AA seq
263 aa
AA seq
DB search
MLNKEDNFFLLAGPCAIEGEEMAMKIAERIVTITHKLNIPYTFKGSFKKANRSRIDSFTG
IGDEKALKILQKVGQTFGVPTVTDIHQVSDAALAAEYVDVLQIPAFLVRQTDLVVAAAET
GKVVNLKKGQFMSPESMQFAVQKVFDSGNKKALITDRGTMFGYQDLIVDFRGIPTMRQFA
PVIMDVTHSLQQPNQQTGVTGGRPDMIETIARAAIVNNADGLFIETHFDPANALSDGANM
LHLDLLEGLLTRLVAIRKTINEF
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgttaaataaagaagataattttttcctcttagcaggtccttgtgccatagaaggagag
gaaatggctatgaaaatagctgaacgcattgttactatcactcataaactgaatattcct
tacactttcaaaggaagttttaaaaaagctaacagaagtaggattgattcatttaccggc
ataggtgatgagaaagcactaaaaatattgcaaaaagtaggacaaactttcggtgtgcct
actgttaccgacattcaccaagtaagtgatgctgcccttgctgccgaatatgtagatgta
ctgcagataccggctttcttagtacgccaaactgacttagtagtagcggctgctgaaaca
ggcaaggtagtaaacctaaaaaaaggacagtttatgagtcctgaaagtatgcagtttgcg
gtacaaaaggttttcgatagtggcaacaaaaaagccctcatcaccgatagaggtacaatg
tttggttaccaagacctaattgttgattttaggggtatccctacgatgcggcagtttgcc
cctgtaataatggatgtaactcactctttacaacagcctaaccagcagacaggagtaaca
ggaggcagacctgatatgattgaaactatagctcgagctgctattgtaaacaatgctgat
ggactatttatagaaacccatttcgaccctgctaatgctctaagcgatggggctaatatg
ctacaccttgacctacttgaaggacttttaacgcgattggttgccattcgcaaaactatc
aacgaattctaa
DBGET
integrated database retrieval system
