Entry |
|
Name |
|
KO |
|
Organism |
clk Capnocytophaga leadbetteri
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:clk00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC53_11170
03430 Mismatch repair
CGC53_11170
03440 Homologous recombination
CGC53_11170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:clk03032]
CGC53_11170
03400 DNA repair and recombination proteins [BR:clk03400]
CGC53_11170
Enzymes [BR:clk01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC53_11170
DNA replication proteins [BR:clk03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC53_11170
DNA repair and recombination proteins [BR:clk03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC53_11170
|
SSDB |
|
Motif |
|
Other DBs |
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LinkDB |
|
Position |
2495227..2496555
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AA seq |
442 aa
MYAILDIETTGGKYDEEGITEIAIYRFDGHEVTDQFISLINPERPIQDFVTKLTGINNKM
LRNAPKFYEVAKRIVEITQDTIIVGHNAAFDYRILQTEFRRLGYDYIRTTLCTVELSQQL
LPEKESYSLGKLVRSLGIPMSERHRASGDALATLNLFKYLLEKDTKKTIITASVKNDVRI
EMNSRHLKILDELPERLGIFYMHNEEGKIIYIGKHKNIKRRVNQLFTSLSKRDRYLQRHT
YKVTYEETGNELIATLKEIEVIQLNKPKCNSRNIHNPSEIVYILSFHYNPQGYLCFSIEL
LATQKEIITTFETKSQAKSFLKKITSEFELNEVDFNGEPVEIYNTHASKVLTKYGFWYQN
VAIVDKGRRVGEKSVILLVDGQIKGYGFFHLNYQLTQLGFLENIITPLPNTLINRHLLDQ
YLRTHPHIKVFNLKEQKPFHNE |
NT seq |
1329 nt +upstreamnt +downstreamnt
ttgtatgcaatattagacatagaaactacaggaggaaagtatgacgaggaaggtataact
gaaatagctatctatcgatttgatggacacgaagttactgaccaatttatctcgcttatc
aatccagagcgccccatacaagactttgtgacaaaattgacaggtattaataataagatg
cttagaaatgctccgaagttttatgaggtagctaagcgcattgtagaaatcacacaagat
actattatcgtagggcataatgcagcttttgattatcgtatattgcaaacagaatttcgc
cgattagggtatgactatataaggacaactctttgtacagtagaactctcacaacaactt
cttcctgaaaaagagtcgtatagtttagggaaattagtacggtcattaggtataccaatg
agtgagcgacatcgtgcttcaggagatgccttagcaacgctcaatctatttaaatatcta
ctcgaaaaagatactaaaaagaccattatcactgcttcagtaaaaaatgatgtacgcata
gagatgaactcacgtcatctgaaaatacttgatgagctgccagaaaggttaggcatattt
tatatgcataatgaagagggaaagattatttacataggtaagcataaaaacattaaaagg
agagtaaaccagttgtttactagtctctcaaaaagagataggtatttgcaacgccatact
tataaagtaacatatgaagagacgggtaacgagcttatagctactttgaaagaaatagag
gttattcagctcaataagcctaaatgcaatagtaggaatatacataatccttctgagata
gtgtatatacttagttttcattataatccgcaagggtatctgtgtttttcaattgagtta
ttggctactcagaaagaaattataacaacctttgaaacaaaatcacaagcaaagagtttt
cttaaaaaaataacatcagaatttgagctgaatgaagtagatttcaatggagagcctgta
gagatttacaatacacatgctagtaaagtattaactaaatacggtttttggtatcaaaat
gtagctatagttgataagggtaggagagtaggagagaagagcgttattctgcttgtagat
gggcaaatcaaaggctatggttttttccatttgaattatcagctcactcagttaggattt
ttagagaatattattacgccgctgcctaatacgttaattaacaggcatctattagatcag
tatctgcgtactcatcctcatataaaagtatttaatttgaaagaacaaaaaccttttcat
aatgaataa |