Campylobacter lari subsp. concheus LMG 11760: CONCH_0122
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Entry
CONCH_0122 CDS
T03557
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cll
Campylobacter lari subsp. concheus LMG 11760
Pathway
cll03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CONCH_0122 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cll03400
]
CONCH_0122 (ung)
Enzymes [BR:
cll01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CONCH_0122 (ung)
DNA repair and recombination proteins [BR:
cll03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CONCH_0122 (ung)
Prokaryotic type
CONCH_0122 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJC88573
LinkDB
All DBs
Position
complement(103115..103804)
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AA seq
229 aa
AA seq
DB search
MDICLEKIKIEQTWKEFLKDEFLKPYFLEIKTHYINALNEGKTIYPPANLIFNAFNLTPL
QDLKIILLGQDPYHNPHQAMGLSFSVPMGVRIPPSLLNIYKELQDDLNIPIARHGDLSKW
AKQGILLLNSILSVEANKPASHAHFGWQKFTDAVISKLSDEKEGLVFLLWGNYAKNKKVL
IDPKKHFILEAAHPSPLARNAFLGCKHFSKSNEILLKLGKSPIDWDLNS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atggatatttgtttagaaaaaataaaaatagaacaaacttggaaagaatttttaaaagat
gagtttttaaaaccttattttttagagataaaaactcattatatcaatgccttaaacgaa
ggaaaaactatatatccgccagcaaatttaatctttaatgcatttaacctaactccttta
caggatttaaaaatcatacttttaggacaagatccttatcacaaccctcatcaagctatg
ggtttaagctttagcgtaccaatgggagttagaattcctccatctttacttaatatctac
aaagaattacaagatgatttaaacattcccatagcaagacatggagatcttagcaaatgg
gctaagcaaggaattttacttttaaattccatcttaagcgtagaggcaaacaaacctgct
tcacatgcacattttggctggcaaaaatttaccgatgcagttatatcaaaacttagtgat
gaaaaagagggattagtgtttttgctttggggaaattatgctaaaaataaaaaggtctta
atcgaccctaaaaaacactttatcctagaagcagcacatccatcacctttagcaagaaat
gcttttttaggctgcaaacatttttcaaaaagcaatgaaattttattaaaacttggcaaa
agtcctattgattgggatttaaactcataa
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