Campylobacter lari subsp. concheus LMG 11760: CONCH_0381
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Entry
CONCH_0381 CDS
T03557
Symbol
addB
Name
(GenBank) exonuclease V, helicase AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cll
Campylobacter lari subsp. concheus LMG 11760
Brite
KEGG Orthology (KO) [BR:
cll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cll03400
]
CONCH_0381 (addB)
Enzymes [BR:
cll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CONCH_0381 (addB)
DNA repair and recombination proteins [BR:
cll03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CONCH_0381 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AJC88825
LinkDB
All DBs
Position
346755..349145
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AA seq
796 aa
AA seq
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MKLFVFSSLRALRKYYEKKLQIDTLVDPAMSIAEFMQKLVFSPHFQATHYECLLLMKKAC
EQTKNLEQSLKIPSNFFAFLKNNAYLFSFFKELSLEKKDISALKHYDAYAQYDEHLQILE
ELFKNYLTLLNEQNLYDDISLALDYEINNDFLKNYDEIIFDFQGFLNAFEVELLLKIKEI
LPLKVQFNCTKFNKDFLSSISFLQGFFLKENHAYLYDVNQAQILQECLFVQENKITYKSF
NLRSLQAAFVFEKINSFLKAGISAKDIVVITPDENFVDILRLYDKNNVLNYANGESIKHT
LFYHRLKTLYESAKDDEFEYELSEDFFNRQKLNKHLCNLHFYPSGVDFIEFKKLFDENIS
FDFFENFIYNLLEDINNQELQDYIYQELTFIKELIKTHTLSFKQILELFFMQIDNKKLSS
VGGGEVTVMGLLESRGLSFDGVIIVDFNDEFIPKRVSSELFLNNEIRKKAGLITHAQREN
LQRHYYYTLIAKAKLVGISYVENEEKIKSRFLSELEFSLIEDRTYSDNAYIKYFQTHKCD
FNLEPITHIMAKHDYFSKELTFTRFHLLINYGLDYYYKYVLGLKEPKELEDTLRANELGS
FIHKALEKYYKQNKKAKYFDYEKFMDIVKNLKDYKIDALNLALMQAMFKEFQVLENEHFE
QGFMVRDCEFSQKKDFIAENGVKITIFGRLDRLDENENEKLVIDYKTGKIDEKTYQLAFY
KFLLEDTYPLENINACFYDLKNMKIIYENTESEKVQELKDMLNELAKDPLEKEFANQRND
NTYSPYTMLYKKEFKL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttttgtttttagctcactaagagctttaagaaaatattatgagaaaaaacta
caaatagatactttggtagatccggctatgagtatagctgaatttatgcaaaaattagtt
ttttctccacattttcaagcaactcattatgagtgtttgcttttgatgaaaaaggcttgt
gaacaaactaaaaatttagaacaaagtttaaaaataccgagtaatttttttgcattttta
aaaaacaatgcttatttatttagtttttttaaagaacttagtttggagaaaaaggatatt
agtgctttaaaacattatgacgcttatgctcagtatgatgagcatttacaaattttagaa
gagctttttaaaaattatcttaccctattaaatgaacaaaatttatatgatgatatttct
ttagcgttagattatgaaattaataatgattttttaaaaaattatgatgaaattattttt
gattttcaaggttttttaaatgcttttgaggtagagcttttgttaaaaattaaggaaata
cttcctcttaaagtgcaatttaattgtactaaatttaataaagattttttaagttctatt
agctttttacaagggttttttcttaaggaaaatcatgcgtatttatatgatgtaaaccaa
gcacaaatattacaagagtgtctttttgtacaagaaaataaaatcacttataaaagtttt
aatttacggtctttgcaagctgcttttgtttttgaaaaaattaacagctttttaaaagct
ggtattagtgcaaaagatattgtagtgattacccctgatgagaactttgtagatatttta
agactttatgataaaaacaatgtattaaactatgccaatggagaaagtatcaaacatacg
cttttttatcatagattaaagactttatatgaaagtgccaaagatgatgagtttgagtat
gagcttagtgaagatttttttaataggcaaaagctaaacaagcacctatgtaatttgcat
ttttatccttctggtgttgattttatagagtttaaaaagctttttgatgaaaatatttct
tttgatttttttgaaaacttcatctataatttgctagaagatattaacaatcaagaattg
caagattatatctatcaagagcttacttttatcaaagaacttataaaaacacatacttta
agttttaagcaaattttagagctatttttcatgcaaattgacaataaaaaactaagcagt
gttggcggtggtgaagttactgtaatggggcttttagaaagtagggggcttagttttgat
ggagtgattattgttgattttaatgatgagtttatccctaaaagggtttcaagtgagtta
tttttaaataatgaaattcgaaaaaaagcaggacttattactcatgctcaaagagaaaat
ttacaaagacattattattacaccctaatagccaaggcaaaattagtaggaatttcttat
gtggaaaatgaagaaaaaatcaagtcaagatttttaagtgagcttgaattttcactcata
gaagatagaacatacagtgacaatgcttatataaaatactttcaaacacacaagtgcgat
tttaaccttgagccaattacacatataatggctaagcatgattattttagcaaagagctt
acttttacgagatttcaccttttgataaattatggcttagattattattataaatatgtc
ttaggactaaaagaaccaaaagaattagaagatactcttagagcaaatgaactaggaagt
tttattcataaagctttagaaaaatactataaacaaaacaaaaaagcaaaatattttgac
tatgaaaaatttatggatattgtaaaaaatttgaaagattacaaaatcgatgctttaaat
ttagctttaatgcaagcaatgtttaaagaatttcaggtgcttgaaaatgagcattttgaa
caaggctttatggtaagagattgtgagttttcacaaaaaaaagattttatcgctgaaaat
ggagttaaaattactatttttggacgtttagatagattagatgaaaatgaaaatgaaaaa
ttagtcatagattataaaactgggaaaatagatgaaaaaacttatcagcttgccttttat
aagtttttattagaggatacataccctttagaaaatataaatgcttgtttttatgattta
aaaaatatgaaaatcatttatgaaaatactgaaagtgaaaaggtgcaagagcttaaagac
atgcttaatgagcttgcaaaagatcctttagaaaaagaatttgctaatcaaagaaatgat
aatacctatagtccttatactatgctttataaaaaggagtttaagctttga
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