Campylobacter lari subsp. concheus LMG 11760: CONCH_0477
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Entry
CONCH_0477 CDS
T03557
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
cll
Campylobacter lari subsp. concheus LMG 11760
Pathway
cll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CONCH_0477 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cll03021
]
CONCH_0477 (rho)
03019 Messenger RNA biogenesis [BR:
cll03019
]
CONCH_0477 (rho)
Transcription machinery [BR:
cll03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CONCH_0477 (rho)
Messenger RNA biogenesis [BR:
cll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CONCH_0477 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
Mor
Spore_III_AA
ATPase_2
AAA
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
AJC88908
LinkDB
All DBs
Position
complement(444980..446284)
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AA seq
434 aa
AA seq
DB search
MENTKEKKQHQRTHIPVEGYKIEDLKLLDLESLVKIANEAEIENPREFRRQDLIFEILKA
QTKKGGFILFTGILEISPEGYGFLRGMDSNLSDSVNDAYVSNSQIRKFALRVGDIVTGQV
REPKDQEKYYALLKIEAINYLPLKEARERPLFDNLTPIFPTEKIKLEYDPLKLTGRMLDL
FAPIGKGQRSLIVAPPRTGKTELMKELATAIAKNHPEAHLIVLLVDERPEEVTDMQRCVK
GEVFSSTFDLPAYNHVRVAELVIEKAKRMVETGKDVIILLDSITRLARAYNTATPSSGKV
LSGGVDANALHKPKRFFGAARNIEHGGSLTIIATALIETGSRMDEVIFEEFKGTGNSEIV
LDRNISDRRIYPAINIIKSGTRKEELLQGVEKLQKIWAIRSAISQMDDIEALKFLYSKML
KTKSNEELLSIMNE
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatacaaaagaaaaaaaacaacaccaaagaacacacattccagtggaaggttat
aagatagaagatttaaagttgcttgatctagaaagcttagttaaaattgctaatgaagca
gaaatagaaaacccaagagaatttagaaggcaagatcttatttttgaaattctaaaagca
caaaccaaaaaaggcggctttatactctttacaggaattttagaaatttcacctgaaggt
tatggctttttgcgtggaatggattcaaatttaagcgatagtgtaaatgatgcttatgta
tcaaactcacaaattcgcaaatttgctctgcgtgttggagatatagttaccggtcaagtt
agagaaccaaaagatcaagaaaaatactatgctttgttaaaaattgaagcgattaattat
cttccattaaaagaagctagagaaagacctttatttgacaatcttactccaatttttcca
actgaaaaaatcaaattagaatacgatcctttaaaactaacaggtagaatgcttgattta
tttgcccctataggaaaaggccaaagaagcttaatcgtagcacctccaagaactggtaaa
actgagctaatgaaagaactagctactgctattgctaaaaatcacccagaggctcatttg
attgtacttttagtagatgagcgccctgaagaagttacagatatgcaaagatgtgttaaa
ggtgaggtttttagctctacttttgacttacctgcttataatcatgttagagtggctgaa
cttgttatagaaaaagcaaaaaggatggtagaaacaggtaaagatgtcattatcttactt
gattctattacaagattagcaagagcttataatactgctactccaagtagcggtaaggtt
ttaagcggcggggtcgatgcaaatgccttacataaaccaaaacgcttttttggtgcagct
agaaatatagaacacggtggctcattaaccattatagcaactgctttgatagaaacaggt
tcaagaatggatgaagtaatttttgaagaatttaaaggaacaggaaatagtgaaatcgtt
cttgatagaaatatttcagacagaagaatttaccctgcaattaacatcataaaatcaggt
actagaaaagaagaattgctccaaggtgttgaaaaacttcaaaaaatttgggcaattaga
tcagctatttcacaaatggatgatatagaagcattaaaatttttatactctaaaatgcta
aaaactaaaagcaatgaagagttattatctatcatgaatgagtag
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