Campylobacter lari subsp. concheus LMG 11760: CONCH_0764
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Entry
CONCH_0764 CDS
T03557
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
cll
Campylobacter lari subsp. concheus LMG 11760
Pathway
cll02020
Two-component system
cll02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cll00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CONCH_0764 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CONCH_0764 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cll03021
]
CONCH_0764 (rpoN)
Transcription machinery [BR:
cll03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CONCH_0764 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AJC89177
LinkDB
All DBs
Position
complement(726386..727633)
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AA seq
415 aa
AA seq
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MLKQKTSITQKAKLSQTLRSWLPILQANIEDLKESLDEFAKENPFIEIKENSSITSNQNK
YYQEYFSKNTTTQMIDAKSLEVKNVYELLSEQIIPPFFPTKKSQTIAEKIIECLNHEGYF
EYDEEILGEFDPLEVEKIRQRFKYLDPVGVGAKDNQEAFIFALEHFDLDDELYEFCKMLI
LNLENAKDFIKDPLYKKAIAIIKKISIPPFLEYFEESMEIIPDIFIYQENGEIKIKINDD
YYPEIAFETDGLDHEFLSAYLKDAKNLIDALAMRKATLYKLGLMIIEYQYDFFMGGDIKP
MQLKDLAQDLERNASTISRAIANKYLSCDRGLIPLKSFFTTAVDDGETSNATIKDFLSNL
IKKENPKKPLSDLKILELTQKEFPSVQLGRRTITKYRMQLGIGSSSERKKLYELM
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacaaaaaacctctataacacaaaaagcaaaactatcgcaaaccttaagatct
tggcttcctatattgcaagctaatattgaagatctaaaagaaagcttagatgaatttgct
aaagaaaatccttttatagagatcaaagaaaactcaagtattacaagcaatcaaaacaaa
tattatcaagaatattttagtaaaaataccaccacgcaaatgattgacgcaaaaagcttg
gaagtaaaaaatgtatatgaacttttaagcgagcaaatcataccaccattttttcctact
aaaaaatcccaaaccattgctgaaaaaatcatagaatgtttaaaccatgaaggttatttt
gagtatgatgaggaaattttaggtgaatttgatcctttagaagtagaaaaaatcagacaa
agatttaaataccttgatcccgttggggtaggggcaaaagataatcaagaagcttttatt
tttgcattagagcattttgacttagatgatgagctttatgaattttgtaaaatgctaatt
ttaaatttagaaaatgcaaaagattttatcaaagatcctttgtataaaaaggctatagcg
ataattaaaaaaatctccattccgccttttttggagtattttgaagagagtatggaaatc
attcctgatatatttatttatcaagaaaatggtgaaattaaaattaaaatcaatgatgat
tattaccctgaaattgcttttgaaacagatggtttagatcatgagtttttaagcgcttat
ttaaaagatgctaaaaatttaatcgatgcactagccatgcgtaaagctaccctttataaa
ctaggacttatgattatagaatatcaatatgattttttcatgggcggggatatcaaaccc
atgcagcttaaagatttagcacaagatcttgaaagaaatgcttcaactatctcaagagca
attgcaaacaaatacttaagttgtgatagaggcttaatacctttaaaatctttctttacc
accgcagttgatgatggtgaaacttctaatgcaacaattaaagattttcttagtaactta
attaaaaaagaaaatcccaaaaagcctttgagtgatttaaaaattcttgaactcactcaa
aaagaattcccaagtgtacaactagggcgtagaactatcactaaatatcgtatgcaactt
ggtataggaagctcaagtgagcgtaaaaaattatatgaattgatgtag
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