Campylobacter lari subsp. concheus LMG 11760: CONCH_0880
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Entry
CONCH_0880 CDS
T03557
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
cll
Campylobacter lari subsp. concheus LMG 11760
Brite
KEGG Orthology (KO) [BR:
cll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cll03016
]
CONCH_0880 (ybbB)
Enzymes [BR:
cll01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
CONCH_0880 (ybbB)
Transfer RNA biogenesis [BR:
cll03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
CONCH_0880 (ybbB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
DSPc
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AJC89290
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All DBs
Position
848440..849423
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AA seq
327 aa
AA seq
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MYKEVDFENFLKFNFDLLIDARSPKEYKLAHIKSAQNYYALNDNEFEEIGTLYKKNKGLA
KAKGASYICENMSKHINKIYQNYKIGSLVGIYCARGGKRSKAIALILAELGYRVVRLEGG
YKAYRSYVSEFFTKDLNIEFLCLCGNTASGKSDLIQTLDNALNLEKLANHQGSSFGKIYG
EQPSQKAFEDELFYFLKDYTHKTCFIEAESRQIGNLTIPLNLYNSMQKAKKIWCECDTNL
RVQRVLKNYAPMDKKVFYQCVEKISPYISKDFKLRLCQNYEENNLELCVKMLFEYYDKVY
KKPTKIDYFIDSSNLDEAKEYLMSLNS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagaagttgattttgaaaattttttaaaatttaattttgatcttttaattgat
gcaagaagtcccaaagaatacaaacttgctcatataaaatctgcgcaaaattactacgca
cttaatgataatgaatttgaagaaataggcacactttataagaaaaacaagggcttagct
aaagcaaaaggtgcaagttatatttgcgaaaatatgagtaagcatattaataaaatttat
caaaattataaaataggctctttagtgggaatttattgcgcaagaggtggtaaaagatca
aaagctattgctttaatcttagctgaacttggttatagggttgtaagattagagggtgga
tataaagcctatagaagttatgtgagtgagttttttactaaagatttaaatattgagttt
ttatgtctttgtggtaatacagcaagtggcaaaagtgatttaatccaaactttggataat
gctttaaatttagaaaaacttgctaatcatcaaggatcaagttttggtaaaatttatgga
gaacaaccaagccaaaaagcttttgaagatgaattgttttattttttgaaagattatacc
cataaaacttgttttatagaagctgaaagcaggcagattggaaatttaactatcccgcta
aatttatacaatagcatgcaaaaagctaagaaaatttggtgtgaatgtgacacgaattta
cgtgttcaaagagttttgaaaaactatgctccaatggataaaaaagtattttatcaatgt
gttgaaaaaatatcaccttatatcagcaaggattttaaactaagactttgtcaaaattat
gaagaaaacaatttagaactttgtgtaaaaatgctttttgaatattatgataaagtatat
aaaaaacctacaaaaattgattattttatcgatagttctaatttagatgaagctaaagaa
tatcttatgagtttaaactcataa
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