Campylobacter lari subsp. concheus LMG 11760: CONCH_0927
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Entry
CONCH_0927 CDS
T03557
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cll
Campylobacter lari subsp. concheus LMG 11760
Brite
KEGG Orthology (KO) [BR:
cll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cll03016
]
CONCH_0927 (truA)
Enzymes [BR:
cll01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CONCH_0927 (truA)
Transfer RNA biogenesis [BR:
cll03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CONCH_0927 (truA)
Prokaryotic type
CONCH_0927 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AJC89335
LinkDB
All DBs
Position
complement(890415..891149)
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AA seq
244 aa
AA seq
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MLLKLTFSYDGSKFQGSATQPHKLSVQDTLAQALSHLGIYEKPLFASRTDKGVHAFNAVA
CVKAGEYFKDFVYLKNKINYFAHPFIHIKHIQRVQENFQVRFNVQKRAYRYIISHEKYNP
FLASYVHFYPKINIKLAKEIAFLFEGEHDFKLFQKEGSDNKTSIRKMYKTRVYAYKNYTV
FYFEANGFLRSQIRMMMASILKVLEGKMCQNELLEQINAKKAHCRFLAPASGLYLSKISY
CNDA
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcttttaaaattaactttttcttatgatggttctaaatttcaaggttcagccactcag
ccacataaacttagtgtccaagataccttagcgcaggccttgtcgcatttgggtatttat
gaaaagcctttatttgcttcaagaactgataaaggtgtgcatgcatttaatgcagtcgct
tgtgtaaaagcgggagagtattttaaagattttgtatatttaaaaaataaaatcaattat
tttgcacacccatttatacatataaagcatatccaaagagtgcaagaaaattttcaagtg
cgttttaatgtgcaaaaaagagcatatcgttatattataagtcatgaaaaatataatcct
tttttagcctcttatgtgcatttttatccaaaaataaatattaaattagccaaggaaatt
gcatttttatttgaaggagagcatgactttaaactctttcaaaaagaaggctctgataat
aaaacaagcataagaaaaatgtataaaactagagtttatgcttataaaaattacactgtg
ttttattttgaagcaaatggttttttaagatcgcaaattagaatgatgatggcaagtatt
ttaaaagtattagaaggaaaaatgtgccaaaatgagcttttagagcaaatcaatgctaaa
aaagctcattgtagatttttagctcctgctagtggtttgtatttgagtaagatttcctat
tgtaatgatgcatga
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