Campylobacter lari subsp. concheus LMG 11760: CONCH_1297
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Entry
CONCH_1297 CDS
T03557
Symbol
uvrA
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cll
Campylobacter lari subsp. concheus LMG 11760
Pathway
cll03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CONCH_1297 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cll03400
]
CONCH_1297 (uvrA)
DNA repair and recombination proteins [BR:
cll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CONCH_1297 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CONCH_1297 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
nSTAND1
nSTAND3
RsgA_GTPase
AAA_16
AAA_21
DnaJ_CXXCXGXG
AAA_33
APS_kinase
Viral_helicase1
AAA_23
YobI-ATPase
zf-MIZ
Motif
Other DBs
NCBI-ProteinID:
AJC89695
LinkDB
All DBs
Position
complement(1263996..1266821)
Genome browser
AA seq
941 aa
AA seq
DB search
MNNDKISIIGAKENNLKNINLEIPKNKLIVFTGLSGSGKSTLAFGTLYAEGQRRYIESLS
AYARQFLDKVGKPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYDYLRLLYARIGSQ
HCHQCGQKISSMSAADIVGEILKLPKGAKIIIYAPLIKEKKGTFADLLENLVTKGYVRAQ
IDGVLTRLDEDIELAKTKKHTIKLVIDRLEVQDDMLARLASDIEKGLSESFGEVEIEVLN
NEELKIPKHFHYSEHNACFDCKISFPLLEPLSFSFNSPKGACPSCDGLGIRYTLDMKKLI
NEELSLEAGAIKLLYGFNKSYYYKFLMAFCEQNDIRVKIPYNELNEEEKRLVLYGNAKEI
NFLWKRHRLSRKFEGVVKYAYEMLKDEKDLSEYMSEKTCKDCNGHRLRAESLAVKVAEKN
LGEILDMSIENTTAFFSKETNFAYLSEQERLIAKPIFKEINERLFFLYDVGLGYLSLGRD
ARTISGGEAQRIRIASQIGSGLSGVMYVLDEPSIGLHERDTAKLIKTLRNLQQKGNTLIV
VEHDKMTIEEADFIVDIGPNAGKFGGEIVFSGTYKELSKSKSQTALYMTGKKQIAHQKNR
EQKDFISLKDVSINNIQNLSVDFPLRNLVAITGVSGSGKSSLILQTLLPFAKEELNRAKK
VKKLSGAKIEGLEKLDKVIYLDQSPIGRTPRSNPATYTGAMDEIRNLFAATKEAKMRGYK
AGRFSFNVKGGRCEKCSGDGEIKIEMHFLPDVMVTCDVCNGKRYNDATLEIKYKGKSIAD
VLSMSIIEASEFFTSVPKIKQKLDTLVKVGLDYLTLGQNATTLSGGEAQRIKLAKELSRS
DTGKTLYILDEPTTGLHFEDVNKLILVLQHLVDLGNSVFVIEHNLDVIKNADYIIDMGPE
GGVKGGKVIAKGSVEELAKNHEKSGSYTGYYLNLELKSTKK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgacaaaataagtatcattggtgctaaggaaaataatcttaaaaatatcaac
ttagaaattcctaaaaataaactcatagtttttacaggacttagtggaagtggtaaatct
actttagcctttggcacgctttatgcagaaggacaacgtcgctatattgaaagtttaagt
gcttatgcgaggcagtttttagataaagtaggtaagccaaatgttgataaaatagaaggt
ttaactcctgctattgctattgatcaaaaaacaacttctaaaaatcctcgatcaactgtt
ggaacgattactgaaatttatgattatctaagacttttatatgcaaggattggctcacaa
cattgtcatcaatgtggtcaaaaaatctcatctatgagtgcagcagatattgtaggtgaa
atcttaaagcttccaaaaggagctaaaatcatcatttatgcacctttgatcaaagaaaaa
aagggaacttttgcagatcttttggaaaatttagttacaaaaggttatgttagagcgcaa
attgatggagttttaacgcgtcttgatgaagatattgagcttgctaaaaccaaaaaacat
actataaaacttgttatagataggcttgaagtgcaagatgatatgctagcaagacttgca
agcgatatagaaaaaggtcttagtgagagctttggcgaagtggaaattgaagttttaaat
aatgaagaattaaaaatacctaagcattttcattatagcgagcataatgcttgttttgat
tgtaaaatttcttttcctttgcttgaacctttgagtttttcttttaattctccaaaaggc
gcttgtccaagttgtgatggtcttggtataagatatacgctagatatgaaaaaacttatc
aatgaagaattaagcttagaagcaggagctataaagcttttgtatgggtttaataaaagt
tattattataagtttttaatggccttttgtgaacaaaatgatatcagggtaaaaattcca
tataatgagttaaatgaagaagaaaagcgtctagtgctttatggtaatgccaaggaaatc
aactttttatggaaaagacatcgcttaagccgtaaatttgaaggtgtggttaaatatgcc
tatgaaatgttaaaagatgaaaaagatttaagcgagtatatgagcgaaaaaacttgcaaa
gattgtaatggtcatcgtttaagagctgagagtttagctgtaaaagttgctgaaaaaaat
ttgggtgaaattttagatatgagcatagaaaatactactgcatttttttcaaaagaaact
aattttgcgtatttaagtgaacaagaaagattgatagctaaacctatttttaaagaaatt
aacgaaagattgttttttctttatgatgtaggacttggatatttatctttagggcgtgat
gcaagaaccattagtgggggtgaggctcaaagaattcgtatagcatctcaaattggtagt
ggcttaagcggggtaatgtatgttttagatgagcctagcattggtttgcatgagcgagat
acagcaaaactcattaaaactttaagaaatcttcagcaaaagggtaatactttaatcgta
gttgagcatgataaaatgactatagaagaagcagattttatcgtagatattggtccaaat
gctggtaaatttggcggtgagattgtatttagtggaacttataaagaattgtcaaaaagc
aaaagccaaactgccctttatatgactggcaaaaagcaaattgctcatcaaaaaaataga
gaacaaaaagattttatcagcttaaaagatgtgagtattaataatattcaaaatctaagc
gtagattttccattgcgtaatcttgtggcgattacaggcgtttcaggaagtggtaagagt
tcattaattttacaaactttacttccatttgcaaaagaagagcttaaccgtgctaaaaaa
gttaaaaaactaagtggggctaaaatagaaggtttagaaaaacttgataaggtgatttat
cttgatcaaagccctataggtcgtaccccgcgttcaaatcctgctacttacacaggcgct
atggatgaaattcgtaatctttttgcagctaccaaagaagctaaaatgcgaggctataaa
gcagggcgtttttcttttaatgttaaaggtggaagatgtgaaaagtgtagcggcgatggt
gagattaaaatcgaaatgcactttttgcctgatgtgatggtaacttgtgatgtttgtaat
ggtaaaagatataatgatgcaactttagagattaaatataaaggtaaaagcatagctgat
gttttaagtatgagtattattgaagcaagtgagttttttacttctgtaccaaaaataaaa
caaaaacttgatactttagtaaaagttggacttgattatcttaccttaggacaaaatgca
actactttaagtggtggggaggctcagcgtatcaaactagctaaagaattaagtagaagt
gatacgggaaaaactctttatattttagatgagcctacaacgggacttcattttgaagat
gttaataaacttattttggttttacaacatttagttgatcttggaaatagtgtgtttgtg
atagagcataatttagatgtgattaaaaatgctgattatatcattgatatgggacctgaa
ggtggggttaaaggtggtaaagttatagctaaaggtagcgttgaagagcttgctaaaaat
catgaaaaaagtggttcttatacggggtattatctaaatttagaactaaaaagcacaaaa
aaataa
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