Campylobacter lari RM16712: UPTC16712_0132
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Entry
UPTC16712_0132 CDS
T03556
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase, family 1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
clm
Campylobacter lari RM16712
Pathway
clm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UPTC16712_0132 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clm03400
]
UPTC16712_0132 (ung)
Enzymes [BR:
clm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
UPTC16712_0132 (ung)
DNA repair and recombination proteins [BR:
clm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UPTC16712_0132 (ung)
Prokaryotic type
UPTC16712_0132 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AJD05680
LinkDB
All DBs
Position
complement(116896..117585)
Genome browser
AA seq
229 aa
AA seq
DB search
MNICLEKIKMEQTWKEFLKDEFLKPYFLEIKAHYINVLNEGKTIYPPANLIFNAFNLAPL
QDLKIILLGQDPYHNPHQAMGLSFSVPMGVKIPPSLLNIYKELQDDLNIPIARHGDLSKW
AKQGILLLNSILSVEANKPASHAHFGWQKFTDAVISKLSNEKEGLVFLLWGNYAKNKKVL
ISTQKHFILEAAHPSPLARNAFLGCKHFSKSNEILLKLGKSTIDWDLNS
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaatatttgtttagaaaaaataaaaatggaacaaacttggaaagaatttctaaaagat
gagtttttaaaaccttattttttagagataaaagctcattatatcaatgtcttaaacgaa
ggaaaaaccatatatccaccagcaaatttaatctttaatgcatttaacctagctcctttg
caggatttaaaaatcatacttttaggacaagatccctaccacaatccccatcaagctatg
ggtttaagctttagcgtaccgatgggagttaaaattcctccatctttacttaatatctac
aaagaattgcaagatgatttaaacattcctatagcaagacatggggatcttagcaaatgg
gccaaacaaggaattttgcttttgaactctatcttaagcgtagaagcaaataaacctgct
tcgcacgcacattttggctggcaaaaatttaccgatgctgttatatcaaaacttagcaac
gaaaaagagggtttggtatttttactttggggaaattatgctaaaaacaaaaaagtttta
atcagcacccaaaaacatttcatcttagaggcggcacatccctcgcctttagcaagaaat
gcttttttaggctgtaagcatttttcaaaaagcaacgaaattttattaaaacttggtaaa
agtactattgattgggatttaaactcataa
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