Campylobacter lari RM16712: UPTC16712_0330
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Entry
UPTC16712_0330 CDS
T03556
Symbol
miaB
Name
(GenBank) isopentenyl-adenosine A37 tRNA methylthiolase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
clm
Campylobacter lari RM16712
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clm03016
]
UPTC16712_0330 (miaB)
Enzymes [BR:
clm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
UPTC16712_0330 (miaB)
Transfer RNA biogenesis [BR:
clm03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
UPTC16712_0330 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AJD05874
LinkDB
All DBs
Position
305309..306607
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AA seq
432 aa
AA seq
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MSKKLFIQTLGCAMNVRDSEHMIAELKEKENYELTQDAKEADLILINTCSVREKPVHKLF
SEVGSFEKIKKNGAKIGVCGCTASHLGDEIFKRAPNVDFVLGARNVSKITKAVNTPKFLG
NDIDFDESNYAFADFRNSLYKTYINISIGCDKHCTYCIVPHTRGDEISIPFEIIKNEALK
AVSKGAKEIFLLGQNVNNYGKRFSNAHEKINFSDLLERLSEIEGLERIRFTSPHPLHMDD
RFLEVFSKNSKVCKSMHMPLQSGSSEILKAMKRGYTKEWYLDRALKLRSMCKDVSISTDV
IVAFPGESDKDFEDTMDVLEKVRFEQMFSFKYSKRPLTKAATMPNQIPDDIASKRLSILQ
ARHTEILDEIVAKQKDKEFEVLFEELRSEGFVAGRSDNNFLIQVKGSEELLGQMKKVKIT
NPRRMVLNGEIL
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaaaaactttttatacaaactttaggttgtgctatgaatgtgcgtgattcagag
catatgatagccgaacttaaagaaaaagaaaattacgaattaactcaagatgcaaaagaa
gcagatttgattttaatcaatacttgctcagtacgtgaaaagcctgtgcataagcttttt
tcagaagttggaagttttgaaaaaatcaaaaaaaatggcgctaaaataggagtttgtggt
tgcactgcttcacatttaggagatgagatttttaagcgtgctccaaatgtggattttgtt
ttgggtgctagaaatgtttctaagatcacaaaggctgtaaatacgccaaaatttttaggt
aatgatatagattttgatgagagtaattatgcttttgcagattttagaaacagcctttat
aaaacctatattaatatctctataggttgtgataaacattgtacttattgtatagtgcct
cacacaagaggagatgaaatttctataccttttgagattattaaaaatgaagcattgaaa
gctgtttctaaaggtgctaaagagatttttttactaggacaaaatgttaataattatggc
aaaagattttctaatgcacatgaaaagattaatttttcagatctcttggaaaggttaagt
gaaatcgaaggtttagagcgtattcgctttacaagcccacacccattacatatggatgat
agatttttagaggttttttctaaaaattctaaagtatgtaagtctatgcatatgccttta
caaagtggttcgagtgaaattttaaaggctatgaaacgcggttacactaaagagtggtat
ttagatagagcattgaaattgcgttctatgtgtaaagatgtgagtatttccactgatgtg
attgtagcttttccaggtgagagcgataaagactttgaagatactatggatgtgcttgaa
aaagtgcgttttgagcaaatgttttcttttaaatactctaaaagaccactaactaaagct
gcaactatgccaaatcaaattcctgatgatatagcttcaaaacgcttgagtattttacaa
gctagacatacagaaattttagatgaaattgttgcaaagcaaaaagataaagaatttgaa
gttttatttgaagaattaagaagtgaaggctttgtagcaggcagaagtgataataacttt
ttgattcaagttaaaggtagtgaagagttattaggacaaatgaaaaaagtaaaaatcacc
aatcctaggcgtatggtgttaaatggcgaaatcctttaa
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