Campylobacter lari RM16712: UPTC16712_0495
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Entry
UPTC16712_0495 CDS
T03556
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
clm
Campylobacter lari RM16712
Pathway
clm00260
Glycine, serine and threonine metabolism
clm00460
Cyanoamino acid metabolism
clm00630
Glyoxylate and dicarboxylate metabolism
clm00670
One carbon pool by folate
clm00680
Methane metabolism
clm01100
Metabolic pathways
clm01110
Biosynthesis of secondary metabolites
clm01120
Microbial metabolism in diverse environments
clm01200
Carbon metabolism
clm01230
Biosynthesis of amino acids
clm01240
Biosynthesis of cofactors
clm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
UPTC16712_0495 (glyA)
09102 Energy metabolism
00680 Methane metabolism
UPTC16712_0495 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
UPTC16712_0495 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
UPTC16712_0495 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
UPTC16712_0495 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
UPTC16712_0495 (glyA)
Enzymes [BR:
clm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
UPTC16712_0495 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AJD06025
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Position
471265..472506
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AA seq
413 aa
AA seq
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MLENFDKEIFDLTQKELARQCDGLEMIASENFTIPEVMEVMGSILTNKYAEGYPGKRYYG
GCEFVDEIETIAIERCKKLFNCNFANVQPSSGSQANQGVYMALLNPGDRILGMDLSHGGH
LTHGSKVSSSGKVYESFFYGVELDGRINYDKVREIAKEVKPKLIVCGASAYPRVIDFAKF
REIADDVGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRGGIIMCNDEEI
AKKINSAIFPGIQGGPLMHVIAAKAVGFKYNLSDEWKIYAKQIIKNTATLAQVLIDRKYD
LVSGGTDNHLILLSFLNKEFSGKDADLALERAGITANKNTVPGETRSPFVTSGLRLGTAA
LTARGFKEEQIAIVANYIADILDDIQNTKLQEEIKVKLKDLASNFIIYERALF
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaaattttgataaagaaatttttgatttaacccaaaaggagctagcaagacaa
tgtgatggtcttgaaatgatagcaagcgaaaattttaccataccagaagttatggaggta
atgggtagcattttaacaaataaatatgcagaaggctatcctggtaaaagatattatggc
ggatgtgaatttgtagatgagattgaaacgattgctatagaaagatgtaaaaaacttttt
aattgtaattttgccaatgtgcaacctagttcaggttcacaagcaaatcaaggtgtgtat
atggcattattaaatcctggtgatagaattttgggtatggatttaagccatggaggacac
ttaactcatggttctaaagtaagttcttctggaaaagtatatgaaagctttttttatgga
gttgagcttgatggaagaattaattatgataaagttagagagatagcaaaagaagttaag
ccaaaacttattgtttgtggtgctagtgcttatcctagagtgattgattttgctaaattt
agagaaatagcagatgatgttggtgcgtacttatttgctgatattgcacatattgcaggt
ttggttgtagcaggtgagcatcctagtccattcccttatgctcatgttgtaagttctact
acacataaaactttaagaggtccaagaggcgggattattatgtgtaatgatgaagaaatt
gccaaaaaaatcaattctgcaattttcccaggtattcaaggtggtccactaatgcatgta
attgctgctaaggcagttgggtttaaatataatttaagcgatgagtggaaaatttatgct
aagcaaatcattaaaaatactgctactttggcacaagttttaatagatagaaaatatgat
ttagttagcggtggtactgataatcatttgattttattaagttttttaaataaagaattt
agcggtaaagatgcagatttagcactagaaagagcaggtattacagctaataaaaatact
gttccaggtgaaactagaagtccttttgtgacgagtggcttaagacttggaacagcggct
ttaacagcaagaggctttaaagaagagcaaattgctattgttgcaaattatatagctgat
attttagatgatatacaaaatactaaattacaagaggagatcaaggttaaactaaaggat
ttagcaagtaattttattatttacgaaagggctttattttga
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