Campylobacter lari RM16712: UPTC16712_0653
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Entry
UPTC16712_0653 CDS
T03556
Symbol
valS
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
clm
Campylobacter lari RM16712
Pathway
clm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
UPTC16712_0653 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clm01007
]
UPTC16712_0653 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clm03016
]
UPTC16712_0653 (valS)
Enzymes [BR:
clm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
UPTC16712_0653 (valS)
Amino acid related enzymes [BR:
clm01007
]
Aminoacyl-tRNA synthetase
Class I (U)
UPTC16712_0653 (valS)
Transfer RNA biogenesis [BR:
clm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
UPTC16712_0653 (valS)
Prokaryotic type
UPTC16712_0653 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1e
DUF1664
tRNA-synt_1f
Perilipin
EXS
Allexi_40kDa
DUF7615
Motif
Other DBs
NCBI-ProteinID:
AJD06166
LinkDB
All DBs
Position
complement(627664..630276)
Genome browser
AA seq
870 aa
AA seq
DB search
MYDKSLEKEYYKICEERGYFEINGNEKIQEKGKNFCIMMPPPNVTGVLHIGHALTCTLQD
ITTRYKRMDGYKTLYQPGLDHAGIATQNVVEKQLLAQGIKKEDLGREEFIKKVWEWKEQS
GGTIVKQMRILGITPAWSRLRFTMDEGLVNAVKKAFVDLYDKKLIVRGNYMVNWCTHDGA
LSDIEVEHKENKGKLYYLKYFLENSQEYIIVATTRPETYFGDSAVMVNPNDERFKHLIGK
NVILPLIDSKIPIIADEHVDMEFGTGFVKVTPAHDHNDYEVGLRHKLEFITIFDEKGILN
EHCLHFKGLERLEARDVIIKELQEKGFVEKIEDYTNQVGYCYRCKNVVEPYISKQWFVKN
EIAKESIEKVNLGGSKFYPAHWINSFNAWMRDLKDWCISRQLWWGHQIPVYYCECSHEWA
SEETPSQCPKCQSANFKQDPDVLDTWFSSGLWAMSTLGWGNKDWGKNTLWHEDDLKDFYP
NSLLITGFDILFFWVARMMFQSTNALGELPFKDIYLHALVKDEQGRKMSKSLGNVIDPVQ
SVDEYSADILRFTLALLAIQGRDIKLSNDKLIQVRNFTNKLYNASKFLLLNEEKFEDLDK
SKIQTNLAKYMLSRFEVCVKETRENLDNYRFNDAANTLYRFFWDEFCDWGIELSKAEKSS
IKELGSIFKEALKLLNPFMPFISEYLYHELSKTSIQTHESIMISKYPKFNSRDEKIEKLF
NIIIESIVSLRRAKTLVELANAKIQKACIKLNNEGLIAELKNYTNFISTLAKCENIEFIS
TNLEKSIRDVSENLEVFIPTQDLDLSGVLNRLNSQKTKLEKEFNKLDAMMKNEKFISNAP
AAVVEQNKTQLESIKTQLEKINDEISNLEG
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgtatgataaatcactagaaaaagaatattataaaatttgcgaagaacgcggatatttt
gaaatcaatggcaatgaaaaaattcaagaaaaaggcaaaaacttttgtattatgatgcca
ccacccaatgtaacaggtgttttacatataggccatgcactaacttgtactttacaagat
atcacaacgcgttataaaagaatggatggctataaaaccctttatcaaccggggcttgat
catgcaggcattgcaacacaaaatgttgtagaaaaacaacttttagctcaaggtattaaa
aaagaagatttaggcagagaagaatttataaaaaaagtatgggaatggaaagaacaaagc
ggtggcactatagttaagcaaatgcgaattttaggtatcactcctgcttggagtcgttta
cgttttaccatggatgagggtttggtaaatgcagtaaaaaaagcctttgtagatctttat
gataaaaaacttattgtgcgtggaaattacatggtaaattggtgtactcatgatggagca
ttaagtgatatagaagttgaacataaagaaaataaaggaaaattatattatttaaaatat
tttttagaaaattctcaagaatacatcatagtagccaccacaagaccagaaacttatttt
ggcgatagtgctgtgatggttaatccaaacgatgaaagatttaaacacttaataggtaaa
aatgtcattttacctttaatagatagcaaaattcctattattgctgatgagcatgtggat
atggaatttggtacaggctttgtgaaagtaaccccagcacatgatcataatgactatgaa
gtaggcttaagacataaacttgaatttatcaccatctttgatgaaaaaggtattttaaat
gaacattgcttgcattttaaaggcttagaaagattagaagcaagagatgttattataaaa
gaattgcaagaaaaaggttttgttgaaaaaatagaagattacactaatcaagtaggatat
tgctatcgttgtaaaaatgtggttgagccatatatttctaaacaatggtttgtaaaaaat
gaaatcgcaaaagaaagcatagaaaaagttaatcttggtggaagcaaattctaccctgca
cattggattaatagttttaatgcttggatgagagatttaaaagattggtgtatttcaaga
caactttggtggggtcatcaaattcctgtgtattactgtgaatgctctcatgaatgggca
agcgaagaaactccaagccaatgcccaaaatgccaaagcgctaatttcaaacaagaccct
gatgttttagacacttggttttcttcaggtctttgggctatgagtactttaggttggggt
aataaagactggggcaaaaacacactttggcatgaagatgatttaaaagatttttatcca
aattctttattaatcaccggctttgatattttatttttttgggttgctagaatgatgttt
caaagcactaatgccttaggtgagcttccttttaaagatatatatttacatgctttggtt
aaagatgaacaaggtagaaaaatgagtaagtctttaggtaatgtcattgatcctgtgcaa
agtgtggatgaatatagtgctgatatcttgcgttttactcttgctcttttagctatccaa
ggtagagatataaaattaagcaatgacaaactcatacaagttagaaattttaccaacaag
ctttataatgcaagcaaatttttacttttaaatgaagaaaaatttgaagatttagataaa
agcaaaattcaaactaacttggcaaaatacatgctgtctcgttttgaagtatgcgtaaaa
gaaacaagagaaaatttagataattaccgctttaatgatgcggcaaatactttgtataga
ttcttctgggatgaattttgtgattgggggatcgagcttagcaaggctgaaaaatcaagt
ataaaagagcttggaagtatttttaaagaagcattaaaacttttaaatccttttatgcca
tttattagtgagtatttataccatgagttaagtaaaacttctatccaaactcatgaatct
ataatgatttcaaaatatcctaaatttaattctagagatgaaaaaatcgaaaaattattt
aatatcattatagaaagcatagtaagtttacgccgtgcaaaaaccttagtagaacttgca
aatgcaaaaattcaaaaagcttgtataaaattaaacaatgagggtttaatagctgagcta
aaaaattacactaatttcatctcaacacttgcaaaatgtgaaaacatcgaatttattagt
acaaatttagaaaaatccatcagagatgtaagtgagaatttagaagtatttataccaact
caagatcttgatttaagcggtgttttaaatagacttaatagtcaaaaaacaaaacttgaa
aaagaatttaacaagctagatgctatgatgaaaaatgaaaaatttatctctaatgcacct
gctgcggttgttgagcaaaataaaactcaacttgaaagcattaaaactcaacttgaaaaa
atcaatgatgaaatttctaatttagaaggctaa
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