Campylobacter lari RM16712: UPTC16712_0657
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Entry
UPTC16712_0657 CDS
T03556
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
clm
Campylobacter lari RM16712
Pathway
clm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
UPTC16712_0657 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clm01007
]
UPTC16712_0657 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clm03016
]
UPTC16712_0657 (aspS)
03029 Mitochondrial biogenesis [BR:
clm03029
]
UPTC16712_0657 (aspS)
Enzymes [BR:
clm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
UPTC16712_0657 (aspS)
Amino acid related enzymes [BR:
clm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
UPTC16712_0657 (aspS)
Transfer RNA biogenesis [BR:
clm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
UPTC16712_0657 (aspS)
Prokaryotic type
Other AARSs
UPTC16712_0657 (aspS)
Mitochondrial biogenesis [BR:
clm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
UPTC16712_0657 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Hjc
Motif
Other DBs
NCBI-ProteinID:
AJD06170
LinkDB
All DBs
Position
complement(632522..634273)
Genome browser
AA seq
583 aa
AA seq
DB search
MRTHYNTELNIQNVGAEVTLCGWVNSYRDHGGVIFIDLRDRSGLIQLVCDPADNQEAHNI
ASSVRNEYVLIAQGKIRPRGEGLVNPKLKTGEIEVVINKLTIENESAVVPFAIGDESVNE
ELRLKYRFLDLRSKKLYDNFALRSTACIAARNSLSSMGFLEVETPILTKATPEGARDYLV
PSRVHQGEFYALPQSPQLFKQLLMCSGFDRYFQIAKCFRDEDLRADRQPEFTQIDIEMSF
CEQKDIIAMTENLLKDIFKACGKEISIPFRQMSYKEAMENYGSDKPDLRFDMKFIDVIDI
FAKSNNEIFANIAKDTKKNRIKALRVPKGDMIFSKRQMQRFEEFVRKFGAAGLAFIQMKE
DGPKGPLCKFFSEEDLNTLIQRCKLEVGDVVFFGAGAKKTVLDYMGRFRLFLAEEMKIID
EDKLEFLWVIDFPMFEQNDDGSYSAMHHPFTMPKNIDEQDLEEINSIAHDVVLNGVELGG
GSIRIHKSPIQQKVFKLLNIDEEEQRKKFGFLLDALSFGAPPHGGIAIGLDRLIMLLTKS
SSIREVIAFPKTQRAQCLMTQAPSEVSNEQMRELGIRLRENTK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
ttgagaactcattataatacagaacttaacatacaaaatgttggcgcggaagtaacatta
tgtggttgggtaaattcttaccgcgatcatggaggtgtaatttttatcgatcttagagat
cgtagcggacttatacaattagtatgcgatcctgcagataatcaagaagcacataatata
gcttcatcagtaagaaacgaatacgttttaatagcacaaggaaaaattcgcccgcgcggt
gaaggacttgtaaatcctaaattaaaaaccggagaaatagaagttgttataaacaaactt
actattgaaaatgaaagcgctgtagtaccttttgctataggcgatgaaagcgtaaatgaa
gaattaagattaaaatatagatttttagatttaagaagtaaaaaactttatgataatttt
gctctaagatcaactgcttgtatagcagcaagaaattctttatcaagcatggggttttta
gaagttgaaacccctattttaactaaagccactccagaaggtgcaagggattatttagta
ccatcacgcgtacatcaaggcgaattttatgccctacctcaaagtcctcaacttttcaaa
caacttttaatgtgttcaggatttgatagatattttcaaattgcaaaatgttttagagat
gaggatttaagagcagatcgtcaacctgaatttactcaaatagacatagagatgagtttt
tgtgaacaaaaagatatcatagctatgacagaaaatttactcaaagatattttcaaagct
tgcggaaaagaaattagcataccttttagacaaatgagttataaagaagctatggaaaat
tatggctctgataagcctgatttaagatttgatatgaaatttattgatgtgattgatatt
tttgcaaaatcaaataacgaaatttttgcaaatatcgcaaaagatacaaagaaaaatcgc
attaaagctttaagagttccaaaaggtgatatgattttttctaaacgccaaatgcaaaga
tttgaagaatttgtgcgcaaatttggagcagcagggcttgcatttatacaaatgaaagaa
gatggtcctaagggcccactttgcaaattctttagtgaagaagatttgaatactttaatt
caaagatgcaaattagaagttggagatgtagtattttttggtgcaggagctaagaaaact
gtgcttgattatatgggtagatttagattattccttgctgaagaaatgaaaatcattgat
gaggataagttagaattcttatgggttattgattttcctatgtttgagcaaaatgatgat
gggagctattctgcaatgcaccatccatttactatgccaaaaaatattgatgagcaagac
ttagaagagattaattctattgcacatgatgtggtgttaaatggtgtagaactaggcggt
ggtagtataagaattcataaaagccctatccaacaaaaagtctttaaacttttaaatatt
gatgaagaagaacaaagaaagaaatttggcttcttgcttgatgcattaagctttggagca
ccaccacatggtggtatagcaataggtcttgatagacttatcatgcttttaacaaaatct
tcaagcattagagaagttatagcatttcctaaaacacaaagagcgcaatgtcttatgact
caagctccaagcgaagtaagcaatgaacaaatgagagaattaggtataagattaagggag
aatactaaatga
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