Campylobacter lari RM16712: UPTC16712_0682
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Entry
UPTC16712_0682 CDS
T03556
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
clm
Campylobacter lari RM16712
Pathway
clm03030
DNA replication
clm03430
Mismatch repair
clm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UPTC16712_0682 (holB)
03430 Mismatch repair
UPTC16712_0682 (holB)
03440 Homologous recombination
UPTC16712_0682 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clm03032
]
UPTC16712_0682 (holB)
03400 DNA repair and recombination proteins [BR:
clm03400
]
UPTC16712_0682 (holB)
Enzymes [BR:
clm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UPTC16712_0682 (holB)
DNA replication proteins [BR:
clm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UPTC16712_0682 (holB)
DNA repair and recombination proteins [BR:
clm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UPTC16712_0682 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
PNGase_F-II_N
Motif
Other DBs
NCBI-ProteinID:
AJD06195
LinkDB
All DBs
Position
654366..655022
Genome browser
AA seq
218 aa
AA seq
DB search
MNLRNKIIIHNDFELMQEKLTEEYGMKNLRFFIPKNPDLELRLNDLTYDKNAQATARAIM
KESYMAEAQAKIIVILARSFREEAQNFLLKLFEEPPKNVYFIIVAPSKNVFLPTILSRFI
VEKHKIQKEKMSLNLDLKKIDLAQIASLLKQYENIDKHECLELISALSHECFKQDIKLND
EEIEFFYKAYELAKLNTKPTILLSTIALILHERKNENY
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
ttgaatctaagaaataaaatcattattcataatgattttgagctaatgcaagaaaagctt
acagaagaatatggtatgaaaaatctaagatttttcatacctaaaaaccctgacttagaa
ttaagactaaatgatttaacttatgacaaaaacgctcaagcaaccgcaagagctataatg
aaagaaagctatatggctgaagcgcaagctaaaatcattgttatactagctagatctttt
cgtgaagaagcgcaaaattttttactaaagctttttgaagagccaccaaaaaatgtatat
tttatcatcgtagctccttcaaaaaatgtttttttgcctactatactttcaagatttatc
gtagaaaagcataaaattcaaaaagaaaaaatgtctttaaatttagatcttaaaaaaata
gatctagctcaaattgcttcattgttaaaacaatatgaaaatatagacaagcatgagtgt
ttagagctaattagtgctttaagccatgaatgttttaaacaagatataaaattaaacgat
gaagaaattgaatttttttacaaagcttatgagctagctaaattaaatacaaagccaact
attttactaagcaccatagctttaattttacacgagagaaaaaatgaaaattattaa
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