KEGG   Campylobacter lari RM16712: UPTC16712_0855
Entry
UPTC16712_0855    CDS       T03556                                 
Symbol
tssI1
Name
(GenBank) type VI secretion system, secreted protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
clm  Campylobacter lari RM16712
Pathway
clm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:clm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    UPTC16712_0855 (tssI1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:clm02044]
    UPTC16712_0855 (tssI1)
Secretion system [BR:clm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   UPTC16712_0855 (tssI1)
SSDB
Motif
Pfam: Phage_GPD Gp5_trimer_C Phage_base_V Gp5_C
Other DBs
NCBI-ProteinID: AJD06365
LinkDB
Position
840044..842509
AA seq 821 aa
MNANNSYLNLKINKLDFKITKAVIKESLDQIFLCECEGFYENINNDIFSDDNIEFDPNML
IDKEASLIIKNPYENKKIDFSTNIDMIYKGIISYVEYLGVNQGSVSNIVKENFKQLNHKH
FFKFNLHSPLIRLDFNKANRIYTHTNIIEAIKQTLAYYNTKLNKNIDFSNIHHIYETKEL
ISQYNESDLEFITRLAHNHGIYFYEDKDNIYFYDFYTHKGKTKDIVFNPNINNHLNEACI
YALNKEKQIQTNAFTHSSNNSKQPLSLYSLSTKAQNTNTHYNEHYYESEYSFTQNINLKQ
SPTLKEKRNSMLNNTLKAKSNIYHLSLNESIKINIQKETTKEYTIIAKEQILIDDAILAN
TINTNDNLNIKDLNLSKSYTNNLTLIPSFLTFTPSFKSKPKPPINTMGMVIGEDSNIENQ
RNTIYTDEYGRVKVRINLYANQEELDNKTNMYHHSPFLRVASSVASNHSGFYHTPRIGDE
VIISFLDDDIDKPFISGSLYNGVNTMPQYNYPRYKREIAEQTLNYLNAIPMYNKGLDELK
LQENTEYNLNYKNEHYLTISNSTIGKDNTDAKARNEITLKNDIDKEEFYILAQKDYKEEI
GNNYEQTIKNNKTSEVGALYTEFITLGHMQNIIGFKNVNVGAKYLENTLLSKDTNVGLSN
TLNVGTDQEVKIHKNSYEKVGENKKVEIGRNYEERITGEYTSSVSSNRKTFIRGYHHIES
QGKYSVHTDSELVTEAKGNIQEHTEKSIFMVAKKDHCVNAENVSSLAQKDNTIVAHNRII
NQVKSTSITTTAKEVIIQVGGVQVIIDDKGLRVKGGDLRAD
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgaatgcaaataactcttatcttaatttaaaaattaacaaacttgattttaaaatcaca
aaagccgttataaaagaaagtctagatcaaatcttcttatgtgaatgtgaaggtttttat
gaaaatatcaataatgatatttttagtgatgataatattgaatttgatcctaatatgctt
attgataaagaagcctcacttataattaaaaatccttatgaaaacaaaaaaatagatttt
tcaactaatattgatatgatttataagggaataatatcttatgttgaatatttaggtgtt
aatcaaggtagtgttagcaatattgtaaaagaaaattttaaacaattaaaccataaacat
ttttttaagtttaacctacactctcctttaataagacttgattttaataaagcaaatcgt
atttatactcatacaaacataatagaagcaattaaacaaaccttagcctattataacacc
aagctaaataaaaacattgatttttctaatattcatcatatatatgaaactaaagaattg
atttctcaatacaatgaaagtgatttagaatttatcacaagattagcacacaatcatggc
atttatttttatgaagataaagataatatttatttttatgatttttatactcataaaggc
aaaacaaaagatatagtttttaaccctaatatcaataaccatcttaatgaagcttgcatt
tatgcactaaataaagaaaaacaaatacaaactaacgcttttactcattctagtaataat
tccaaacaacctttaagtttatactcattaagcacaaaagcacaaaacactaacacacat
tataatgagcattattatgaaagcgagtattcttttacgcaaaatatcaatttaaaacaa
tcccctaccctaaaagaaaaaagaaattctatgcttaataatacactaaaagcaaaaagc
aatatttatcatcttagtttaaatgaaagtattaaaattaatattcaaaaagaaactact
aaagaatacaccattatagcaaaagaacaaattttaatcgatgatgctattttagctaat
actatcaacaccaatgataatttaaatattaaagacttaaatctaagcaaatcttataca
aataatttaacccttatcccatcttttttaacctttacacctagttttaaatccaaacca
aaacctccaattaacaccatgggtatggttataggggaagattctaatatagaaaatcaa
agaaataccatatacacagatgaatatggaagagtaaaggtaaggattaatctttatgct
aatcaagaagaattagataataaaacaaacatgtatcatcatagtccattcttaagagta
gctagtagtgtagcaagcaatcattcaggtttttatcatacaccaagaataggagatgaa
gttattatttcatttttagatgatgatatagacaagccttttattagtgggagtttatat
aatggggtgaatactatgccacaatataactacccaagatacaaaagagaaatcgctgaa
caaacactaaattatctaaatgctatacctatgtataataaaggcttagatgaacttaaa
ctacaagaaaatacagaatataatctaaattataaaaacgaacattatctaactatctct
aattctactataggaaaagataataccgatgcaaaagcaagaaatgaaatcactttaaaa
aatgatatagacaaggaagaattttacattctagcacaaaaagattacaaagaagaaata
ggcaacaactatgagcaaactataaaaaataacaaaacctcagaagtaggagctttatat
accgaattcattactttaggacatatgcaaaatatcataggttttaaaaatgtcaatgta
ggggcaaaatatttagaaaataccctgctttctaaagatactaatgtgggcttaagtaat
accttaaatgtaggaacagatcaagaagtaaaaatccataaaaatagctatgaaaaagta
ggagaaaataaaaaggtagaaataggcagaaactacgaagaaagaattacaggagaatac
acaagttctgtatcatctaatagaaaaacatttattagaggttatcatcatatagaaagt
caaggaaaatatagtgttcatacagattctgaacttgtaacagaagcaaaaggcaatatt
caagagcatacagaaaaatctatctttatggttgctaaaaaagatcactgtgttaatgca
gaaaatgtttcatctttagcacaaaaagacaatactattgtagcgcacaatagaataatt
aatcaagtaaaatccacttctataacgaccacagctaaagaagttattatccaagttgga
ggggttcaagtaattatagacgataaaggtttaagagttaaaggaggagatttaagagca
gattaa

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