KEGG   Campylobacter lari RM16712: UPTC16712_0880
Entry
UPTC16712_0880    CDS       T03556                                 
Symbol
tssC
Name
(GenBank) type VI secretion system, tubular sheath protein
  KO
K11900  type VI secretion system protein ImpC
Organism
clm  Campylobacter lari RM16712
Brite
KEGG Orthology (KO) [BR:clm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:clm02044]
    UPTC16712_0880 (tssC)
Secretion system [BR:clm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   UPTC16712_0880 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: AJD06390
LinkDB
Position
868837..870291
AA seq 484 aa
MSKEKVIDTPIIESIMEKSKYARNDECYSIAKRGVAEFISAIVESDNVEDKINKFALDEM
IAHVDDLLSKQMDEILHNEEFQKLESTWRGLFFLVERTDFNENIKINLFDITKEEALEDF
ENNPDITQSVVYKNIYSSEYGQFGGEPVGAIIGDYQLSTASPDMTFLNKMSSIAAMSHSP
FLTSLGPKFFGLENYSELANIQDLQSLLEGPQYTRWRTFRENEDSKYTGLMVTRFLTRSP
YDSEENPIKSFNYKENVHASHNHLLWGNSTYAFATRLTESFAKYRWCGSIIGPKSGGSVK
DLPTYFYENFGNLKAKIPTEVLITDRREYELAENGFITLTLRRDTNNAAFFSANSALKPK
IFPNTPEGKEAETNYRLGTQLPYVFLISRLAHYLKVLQREEIGSWKERSDIENGLNEWIR
QYISDQENPPAEVRSRRPFRGAQVKVDNIPGEPGWYKIGLSVRPHFKYMGGNFELSLVGK
LDKE
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgtcaaaagagaaagtaattgatactccaattattgaaagtattatggaaaaaagtaaa
tacgctaggaatgatgaatgttacagtatagcaaaaagaggagtggctgaatttatttct
gcaatcgttgaaagtgacaatgtagaagataaaattaataaatttgcacttgatgaaatg
attgctcatgtcgatgatttactatcaaaacaaatggatgaaattttacataatgaagaa
ttccaaaaattagagtcaacatggagagggcttttctttttggtagaaagaactgatttt
aatgaaaatattaaaattaatctttttgatattaccaaagaagaagctttagaggatttt
gaaaataatccagatattactcaaagtgttgtttataaaaatatttattcttcagaatat
gggcaatttggtggagagccagttggtgctataattggcgattatcaactaagtactgca
agtccagatatgacttttttaaataaaatgtcaagcatagctgcaatgagccattcacca
tttttaacttctttagggcctaaattttttggtttagaaaactactcagaattagccaat
attcaagatttacaaagtcttcttgaaggccctcaatatacaagatggagaacttttaga
gaaaatgaagattctaaatacacaggattaatggttacaagatttctaacaagatctcct
tatgatagcgaggaaaatcctattaaaagttttaattataaagaaaatgttcacgcatct
cacaatcatttactatggggaaattcaacatatgcttttgcaacaagattaacagaaagt
tttgctaaatatagatggtgtggtagcataattggtccaaaaagcggaggaagcgtcaaa
gatcttccgacttatttttatgaaaattttggcaacttaaaagctaaaattcctaccgaa
gttttaattacagatagaagagaatatgaacttgcagaaaatgggtttataaccttaacc
ctaagaagagatactaataatgcagcatttttctcagcaaattccgctctaaaacctaag
atttttccaaatacaccagaaggaaaagaagctgagacaaattatcgcttaggcactcaa
ctaccttatgtctttttaatttcaagattagcacattacctcaaagtattacaaagagaa
gaaataggaagttggaaagaaagaagcgatattgaaaatggtttaaatgaatggattaga
caatatatttcagatcaagaaaacccaccagcagaagttagaagtagaagaccttttaga
ggagcacaagtaaaagtagataacataccaggggaacctggttggtacaagattggatta
agtgttcgtcctcattttaaatatatgggtggaaattttgaactatctttagtaggtaaa
ctagataaagaataa

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