Campylobacter lari RM16712: UPTC16712_0926
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Entry
UPTC16712_0926 CDS
T03556
Symbol
ybbB
Name
(GenBank) tRNA 2-selenouridine synthase
KO
K06917
tRNA 2-selenouridine synthase [EC:
2.9.1.3
]
Organism
clm
Campylobacter lari RM16712
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clm03016
]
UPTC16712_0926 (ybbB)
Enzymes [BR:
clm01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.3 tRNA 2-selenouridine synthase
UPTC16712_0926 (ybbB)
Transfer RNA biogenesis [BR:
clm03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
UPTC16712_0926 (ybbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhodanese
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AJD06433
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All DBs
Position
920088..921071
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AA seq
327 aa
AA seq
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MYKEVDFENFLKFNFDLLIDARSPKEYKLAHIKSAQNYYALNDNEFEEIGTLYKKNKGLA
KAKGASYICKNMSEHINKLYQDYKIGSLVGIYCARGGKRSKAIALILAELGYRVVRLEGG
YKAYRSYVSEFFRKDLNIEFLCLCGNTASGKSDLIQTLDNALNLEKLANHQGSSFGKIYG
EQPSQKAFEDELFYFLKDYTYKTCFIEAESRQIGNLTIPLNLYNSMQKAKKIWCECDMNL
RIQRVLKNYTPMDKKVFYQSVDKISPYISKDFKMKLCQKYEENNLELCVKMLFEYYDKVY
KKPVKIDYFINSSNLDEAKKHLMSFNS
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagaagttgattttgaaaattttttaaaatttaattttgatcttttaattgat
gcaagaagccccaaagaatacaaacttgctcatataaaatctgcgcaaaattactacgca
ctcaatgataatgaatttgaagaaataggcacactttataagaaaaacaaaggcttagct
aaagcaaaaggtgcaagttatatttgtaaaaatatgagcgagcatattaataaactttat
caagattataaaataggctctttggtgggaatttattgcgcaagaggtggtaaaagatca
aaagctattgctttaatcttagctgaacttggttatagggttgtaagattagaaggtgga
tataaagcttatagaagctacgtgagtgagttttttagaaaagatttaaatattgagttt
ttatgtctttgtggcaatacagcaagtggcaaaagtgatttaatccaaactttagataat
gccttaaatttagaaaaactagccaaccaccaaggatcaagttttggtaaaatttatgga
gaacaaccaagccaaaaagcctttgaagatgaattgttttattttttaaaagattatacc
tataaaacttgttttatagaagctgaaagcagacaaattggaaatttaactattccttta
aatttatacaatagcatgcaaaaagctaagaaaatttggtgtgagtgtgatatgaattta
cgcattcaaagagttttaaaaaactatactccaatggataaaaaagtattttatcaaagt
gttgataaaatctcaccctatatcagtaaagatttcaaaatgaaactttgtcaaaaatat
gaagaaaacaatttagaactttgtgtaaaaatgctttttgaatactatgataaagtatac
aaaaaacctgtaaaaattgattattttatcaatagttctaatttagatgaagctaaaaaa
catcttatgagttttaactcataa
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