Campylobacter lari RM16712: UPTC16712_0995
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Entry
UPTC16712_0995 CDS
T03556
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
clm
Campylobacter lari RM16712
Pathway
clm02024
Quorum sensing
clm03060
Protein export
clm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
UPTC16712_0995 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
UPTC16712_0995 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UPTC16712_0995 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
clm02044
]
UPTC16712_0995 (ffh)
Enzymes [BR:
clm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
UPTC16712_0995 (ffh)
Secretion system [BR:
clm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
UPTC16712_0995 (ffh)
Eukaryotic Sec-SRP protein
UPTC16712_0995 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
CbiA
SRP54_N
AAA_31
AAA_22
AAA_19
nSTAND3
6PF2K
Zeta_toxin
YqeC
AAA
Fer4_NifH
AAA_30
AAA_24
DUF6471
ResIII
AAA_33
AAA_14
KTI12
Motif
Other DBs
NCBI-ProteinID:
AJD06501
LinkDB
All DBs
Position
complement(979862..981199)
Genome browser
AA seq
445 aa
AA seq
DB search
MFEIVSESFKSAVNKLRFVDDEKALKNALDTLKKALLKADVHHKVTKELLTLVENDVKTN
GIGQKQFLESIKKNLEEILSVKGKNQGFVFASKPPTVVLMCGLQGGGKTTTTVKIANYLK
LRNKKVLIAACDLQRLAAVEQLRQLTQANELDLFFIENESNPLNVAKQALEKAKNSMYDV
LLVDTAGRLAIDIALMNELKEVKAILNPDEVFYVADAMSGQDGVKTASSFNEALEITGVI
LSKFDADTKGGVALGIAKQIGVPLRFIGVGEKVADLEVFIPDRIVNRIMGEGDLATLAEK
TAAIIDEKEAKKLNKKIKKGEFNFNDFLNQMESVKKLGSMKSIIGMIPGLSSMAANIKDI
DLDNSKEIIHIKAMISSMTPKERENPDLLNNARKRRIAEGAGLSQMEVNRFLKQFSNAAK
LAKKFSNKKGMENFMNMLQQAKRPQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgaaatagttagtgagtcgtttaaatccgcagttaataaacttcgttttgttgat
gatgaaaaagctttaaaaaacgctcttgacactttaaaaaaagcccttttaaaagcagat
gtacatcataaagttactaaagaattacttactttagtagaaaatgatgtaaaaactaat
ggtataggtcaaaaacaatttttagaatcaattaagaaaaatttagaagaaattcttagt
gttaaaggtaaaaatcaaggttttgtatttgctagtaagccacctacagttgttttgatg
tgtggtttacaaggtggtggtaaaactactactacggtaaaaattgctaattacttaaag
ctaagaaataaaaaagtattaattgctgcatgtgatttgcaaagattagccgcagtagaa
cagctaagacaacttacccaagctaatgagcttgatttgttttttatagaaaatgaaagc
aatcctttaaatgtagctaaacaagctttagaaaaagcaaaaaattctatgtatgatgtt
ttacttgtagatactgccggccgtttagcgatcgatatagctttgatgaatgagcttaaa
gaagtaaaagctattttaaatcctgatgaagtgttttatgtagctgatgctatgagtggt
caagatggtgttaaaacagcaagcagctttaatgaagctttagaaattacaggggttatt
ttaagtaaatttgatgcagatactaaaggtggtgttgcactaggtatagcaaaacaaatt
ggtgtgcctttaagatttattggtgttggcgagaaagtagctgatttagaagtgtttatc
cctgatagaattgttaatcgtatcatgggcgagggtgatttagcgactttagctgaaaaa
actgcagcgattattgatgaaaaagaagcaaaaaaacttaataagaaaattaaaaaaggc
gaatttaattttaatgactttttaaatcaaatggaaagtgttaaaaaacttggtagtatg
aaatcaatcattggtatgatacctggtttatcatctatggcagcaaatattaaagatatt
gatttggataattctaaagaaattattcatattaaggcaatgatttcatcaatgacacca
aaagaaagagaaaatcctgatttactaaacaatgcaagaaaacgtcgtatcgcagagggt
gctggtttgtctcaaatggaagtaaatcgctttttaaaacaatttagtaatgcagctaag
ttggcaaagaaattttcaaacaaaaaaggaatggaaaactttatgaatatgttgcagcaa
gctaaaagaccacaataa
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