Campylobacter lari RM16712: UPTC16712_1026
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Entry
UPTC16712_1026 CDS
T03556
Symbol
dnaQ
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
clm
Campylobacter lari RM16712
Pathway
clm03030
DNA replication
clm03430
Mismatch repair
clm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UPTC16712_1026 (dnaQ)
03430 Mismatch repair
UPTC16712_1026 (dnaQ)
03440 Homologous recombination
UPTC16712_1026 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clm03032
]
UPTC16712_1026 (dnaQ)
03400 DNA repair and recombination proteins [BR:
clm03400
]
UPTC16712_1026 (dnaQ)
Enzymes [BR:
clm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UPTC16712_1026 (dnaQ)
DNA replication proteins [BR:
clm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UPTC16712_1026 (dnaQ)
DNA repair and recombination proteins [BR:
clm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UPTC16712_1026 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
HTH_52
Motif
Other DBs
NCBI-ProteinID:
AJD06531
LinkDB
All DBs
Position
complement(1010159..1010923)
Genome browser
AA seq
254 aa
AA seq
DB search
MSQQQIDDLIIKLSKENKPFPWVLKELEKIEELNHYDFDLYIFELLGLGVELNAQNCMCL
KSKNTKIKDEIFCVVDIESTGGIKSGQILEIGAVKIQNCKEIDRFESFIKVESIPENITE
LTGISLDMVENAPSLKTVLSDFKLFLKDSIFVAHNVRFDYHFISKAMYENDFGVLLNRRL
CTIDLAKKCIESPKYGLDALKEFLCIESKHHRALSDALAASEILKYCLKKIPFYIKTTEE
LLHFSKQAKNQIKK
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
ttgagccaacaacaaatcgatgatttaatcatcaagctaagtaaagaaaacaaacctttt
ccttgggttttaaaagagcttgagaaaatagaagaactaaatcactatgattttgattta
tatatttttgagcttttaggactaggggtagagcttaatgcgcaaaattgtatgtgtttg
aaaagtaaaaatacaaaaataaaagatgagattttttgtgtagtagatattgaaagcacc
ggtgggataaaaagtggtcaaattttagaaataggtgcagtgaaaattcaaaactgtaaa
gaaattgatagatttgagagttttataaaagtagaaagtatacctgaaaatattacagaa
ttaacagggattagtttggatatggtagaaaatgcaccttctttaaaaactgtgttaagt
gattttaagttgtttttaaaagatagcatttttgtagcacataatgtgcgttttgattat
cattttatatctaaagctatgtatgaaaatgattttggagtacttttaaatagaagatta
tgtactattgatttagctaaaaaatgcattgaaagtcccaaatacggccttgatgctcta
aaagagtttttgtgtattgaaagtaagcatcatagagctttaagtgatgctttggctgca
agcgaaattttaaaatactgtcttaaaaaaattcctttttatataaaaactaccgaagaa
ttgttacattttagcaagcaagctaaaaatcaaataaaaaaataa
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