Campylobacter lari RM16712: UPTC16712_1056
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Entry
UPTC16712_1056 CDS
T03556
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
clm
Campylobacter lari RM16712
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clm03016
]
UPTC16712_1056 (truB)
Enzymes [BR:
clm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
UPTC16712_1056 (truB)
Transfer RNA biogenesis [BR:
clm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UPTC16712_1056 (truB)
Prokaryotic type
UPTC16712_1056 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-ProteinID:
AJD06561
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All DBs
Position
1042860..1043678
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AA seq
272 aa
AA seq
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MNKLFVAYKPSGMSSNAFLGKLKKKYKNKKAGFSGTLDPFAQGVLLIAFDQYTKLFRFFD
KNPKVYKATLWLGVHSLSLDNQNIKEINLINAFDEQILEQIKNELLGKITYTPPAFCAKK
IDGVRSYELAKRGFEVNLKPCVMEIFYTKILHYNHPFLTIEIAVSEGSYIRSYCELFARK
LGIKATLSSLERLSEGKFFYENEKELNPLAYLNLRKNTIKYPQKLHNGQKIFLDDLEIQE
EGSYILEEKDFFSIISIQDNQVQYYLNKVLKC
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaataaactttttgtagcttacaaaccaagtggaatgagttctaatgcttttttaggc
aaactcaaaaaaaaatataaaaacaaaaaagcaggtttttcaggaacacttgatcctttt
gcacaaggtgttttactcatagcctttgatcaatacacaaaactttttcgtttttttgat
aaaaatccaaaggtttacaaagcaacgctttggctaggcgtgcattcactaagccttgat
aatcaaaatatcaaagagatcaatcttataaatgcttttgatgagcaaattttagaacaa
attaaaaatgaacttttaggtaaaatcacctacaccccacccgcattttgcgcaaaaaaa
atagatggagtgcgctcttatgagcttgcaaaaagaggttttgaagtcaatttaaaaccc
tgtgttatggaaattttttatactaaaattttacattacaatcatccttttttaaccata
gaaatagcagttagtgagggttcttatatacgctcttattgtgaattatttgctagaaaa
cttggtattaaagccacgctaagctcattagaacgcttaagtgaaggaaagtttttttat
gagaatgaaaaagagttaaatcctttagcttatttaaatcttagaaaaaatacgataaaa
tacccccaaaaattacacaatggacaaaaaatatttttggacgatttggaaattcaagaa
gaaggtagctatattttagaagaaaaagattttttttctatcatttctatccaagataat
caagtgcaatattatttaaataaggtattaaaatgttaa
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