Campylobacter lari RM16712: UPTC16712_1218
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Entry
UPTC16712_1218 CDS
T03556
Symbol
gatB
Name
(GenBank) Glu-tRNA(Gln) amidotransferase, subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
clm
Campylobacter lari RM16712
Pathway
clm00970
Aminoacyl-tRNA biosynthesis
clm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
UPTC16712_1218 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
clm03029
]
UPTC16712_1218 (gatB)
Enzymes [BR:
clm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
UPTC16712_1218 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
UPTC16712_1218 (gatB)
Mitochondrial biogenesis [BR:
clm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
UPTC16712_1218 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
AJD06720
LinkDB
All DBs
Position
complement(1209422..1210840)
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AA seq
472 aa
AA seq
DB search
MFEVVIGLEVHAQLNTKTKIFCSCATSFGEKSNTNVCPTCLALPGALPVLNQEAVKKAIA
FGKAVNATINKKSIFNRKNYFYPDLPKAYQISQFDIPIVENGELFINVNGENKRIGITRA
HLEEDAGKNIHESNFSKVDLNRAGTPLLEIVSEPELRSSDEAVAYLKKLHSIIRFLDISD
ANMQEGSFRCDANVSIRPKGDDKLYTRVEIKNLNSFRFIQKAIEYEVKRQSEAWEDGKYV
QEVVQETRLFDTVNLVTRSMRGKEDSAEYRYFPDPDLLPVILDDEMLNQDIPELPDEKKA
RFVSELGIKESDSEVIVSSLELCRYFEYLIDQKLNPKLCVTWLTTELMGLLKGELTIENS
PVKQEKLAILIKRIEEGVISAKAGKDILAYVFENTEVEIDDAIEKLGLKQVSDDGAIEKI
IDEILANNEDKVAEYKSGKDKLFGFFVGQAMKAGKGAFNPAKVNEILKAKLG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagttgttataggacttgaagttcatgcacaattaaatacaaaaacaaaaatc
ttttgctcatgtgcgacttcttttggagaaaaatcaaatactaatgtatgcccaacatgt
ttagctttaccaggtgctttacctgtattaaatcaagaagcggtaaaaaaagccatagca
tttggaaaagcagttaatgcaactataaataaaaaaagtatttttaatagaaaaaattat
ttttatcctgatttgccaaaagcttatcaaatttcgcaatttgatattcctatagtagaa
aatggcgagttgtttatcaatgtaaatggagaaaataaacgcataggtattactagagct
catttagaagaagatgcaggaaaaaatatacatgagagtaatttttcaaaagtagattta
aatagagcaggtacgcctttgcttgaaatcgttagtgagcctgaacttagaagttctgat
gaggcagtggcttatttgaaaaagcttcattctattataagatttttagatatttcagat
gcaaatatgcaagaaggtagttttagatgtgatgctaatgttagtattcgtccaaagggc
gatgataagctttatactagagtcgagattaaaaacttaaattcatttcgttttatccaa
aaggcgattgagtatgaagtaaaacgccaaagtgaagcttgggaagatggaaaatacgta
caagaagttgtacaggagacaagattatttgatacggttaatttagttactagaagtatg
agaggtaaagaagactctgctgaatatagatatttccctgatcctgatcttttacctgta
attttagatgatgaaatgctaaatcaagatatacctgaacttcctgatgagaagaaagct
agatttgttagtgaattaggtattaaagaaagtgatagtgaagtgattgtgtcttcattg
gagctttgtagatattttgagtatttaattgatcaaaaattaaacccaaaactttgtgtt
acttggcttacgaccgagttaatgggacttttaaaaggtgagttaactatagaaaactca
cctgtaaaacaagaaaaattagctattttgatcaaacgtatagaagaaggtgttattagt
gctaaagcaggtaaggatattttagcttatgtgtttgaaaacacagaagttgaaattgat
gatgctattgaaaaacttggtttaaaacaagtaagcgatgatggtgctattgaaaagatt
atagatgaaattttagcaaacaatgaagataaagtggctgaatataaaagtggtaaagat
aaactttttggtttctttgttggtcaagcaatgaaagcgggtaaaggtgcatttaatcct
gccaaggtaaatgaaattttaaaagcaaaacttggttaa
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