Campylobacter lari RM16712: UPTC16712_1386
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Entry
UPTC16712_1386 CDS
T03556
Symbol
carB
Name
(GenBank) carbamoylphosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
clm
Campylobacter lari RM16712
Pathway
clm00220
Arginine biosynthesis
clm00240
Pyrimidine metabolism
clm00250
Alanine, aspartate and glutamate metabolism
clm01100
Metabolic pathways
clm01110
Biosynthesis of secondary metabolites
clm01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
clm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
UPTC16712_1386 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
UPTC16712_1386 (carB)
00220 Arginine biosynthesis
UPTC16712_1386 (carB)
Enzymes [BR:
clm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
UPTC16712_1386 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_2
PylC-like_N
MACPF_b-prism
CoA_binding_2
Ceramidse_alk_C
Motif
Other DBs
NCBI-ProteinID:
AJD06883
LinkDB
All DBs
Position
complement(1374669..1377932)
Genome browser
AA seq
1087 aa
AA seq
DB search
MPKRTDIKNILLIGSGPIVIGQACEFDYSGTQAAKTLKELGYRVVLINSNPATIMTDPEF
ADATYIEPITKESILSIIKKEKIDAILPTMGGQVALNVAMEVYESGELADVKFLGANPEA
IKKGEDRQVFKECMKKIGMDLPKSMYAYNYEEALKAVDEIGFPLMIRASFTLGGAGSGVV
YNMDEFAELANTALALSPIHEILIEESLLGWKEYEMEVIRDKNDNCIIVCSIENVDPMGV
HTGDSITIAPALTLTDKEYQAMRNASFAILREIGVDTGGSNVQFAINPTNGRMIVIEMNP
RVSRSSALASKATGYPIAKVATLLAVGFSLDEIKNDITGTPASFEPVIDYIVTKIPRFTF
EKFPNASTELGTAMKSVGEVMAIGRTFKESIQKALCSLERNLSGFDTIECDKNELLAKIR
QANEKRLLYIAQAFREGFSTQELFELCKIDPWFLTQIKEIVEFENQIDMDILSNKQLLRK
AKTLGFSDKKIASLINQKDNLELSQNDIYYARIKHKIIAQYSEVDTCAGEFEALTPYLYS
SINANEATQVKESKDKKDKKVMIIGGGPNRIGQGIEFDYACVHASFALKDMGVKTIMYNC
NPETVSTDYDTSDILYFEPIDFEHLRAVIDRERPDGVIVHFGGQTPLKFAKRLSAFGAKI
IGTSARVIDLAEDRKKFAKFIEDLGINQPKNGTAISVEEAIIKANEIGYPVLVRPSYVLG
GRAMRVVHDESELRLYMQEAVDVSDKSPVLIDQFLDNATELDVDAISDGKEVYVAGIMEH
IEEAGIHSGDSACSLPAVNIDEAMLEMIEQKTKDIALNLGVVGLLNIQFAIHDNKLYMIE
VNPRASRTVPFVSKATGIPLAKVATRVMWQGNLRESLKFYDTFKVVEEKNGILRAKKPKH
ISVKSVVFPFAKLSGSDLELGPEMRSTGEVMGVSKDFENSYAKSQLASSNFLPESGNVFL
SLREQDKKYAVDLANEYIKLGFKIIATSGTYKILQEAGLECEFVHKISEGRPNVEDKLKN
SQIQLAINTSDEHSFKGDTKKIRANILRFKTPYFTNLRAAYAGAKAIKAIQNKSCLEVKS
LQEYLKA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagaacagatatcaaaaatatattattaataggcagtgggcctatcgttata
ggtcaagcttgtgagtttgattactcagggactcaagcggcaaaaaccttaaaagagcta
ggttatagagtagttttgatcaattctaatccagctacgatcatgacagatcctgaattt
gctgatgcaacttatatagaaccaattaccaaagaaagtattctaagtattatcaaaaaa
gaaaaaatcgatgcgattttacctactatgggtggtcaagttgctttgaatgttgctatg
gaagtttatgaaagtggtgagcttgcagatgtcaagtttttaggtgcaaatcctgaggcg
attaaaaaaggcgaagatagacaagtttttaaagaatgtatgaaaaaaattggcatggat
ttgccaaaatctatgtatgcgtataattatgaagaggctttaaaagctgttgatgagatt
ggttttcctttgatgattagagcttcttttaccttaggtggtgcaggaagtggcgtggtg
tataatatggatgagtttgcagagcttgcaaatactgctttagcactcagtcctatccat
gaaattttaattgaagaaagcttacttggttggaaagaatatgaaatggaagtcattaga
gataaaaatgataattgtattatcgtttgctctattgaaaatgttgatcctatgggggtt
catacgggtgattctatcactatagctcctgctttaactttgactgataaagagtaccaa
gcaatgcgtaatgcctcttttgctattttaagagaaattggagtagatacaggcggatca
aatgtgcaatttgctatcaatccaactaatggtagaatgatagtcattgaaatgaatcct
agggtttcaagatcttcagccttagctagtaaagcaacgggttatcctatagctaaggta
gctacgcttttagcagttggatttagtttagatgagattaaaaacgacatcacaggcact
cctgcttcatttgaaccggtaattgattatattgtaactaaaattcctcgctttactttt
gaaaaattcccaaatgcaagcacagagcttggcactgctatgaaaagcgtgggtgaggtt
atggctatagggagaacttttaaagaaagcattcaaaaagcactttgctcacttgagaga
aatttaagtgggtttgatactatagaatgtgataaaaatgagcttttggcaaaaattcgc
caagctaatgaaaaacgcttgctttatatagcacaagcttttagagaaggttttagcacg
caagagctttttgagctttgcaaaatagatccttggtttttaactcaaatcaaagaaata
gtggaatttgaaaatcaaatagatatggatattttaagcaataaacaactattaagaaaa
gccaaaaccttaggtttttcagataaaaaaatcgctagtttgattaatcaaaaagataat
cttgagctaagccaaaatgatatttattatgcaagaattaaacataaaatcatcgctcaa
tatagcgaagtagatacttgtgcgggcgaatttgaagcattaactccgtatttatactca
agtatcaatgcaaatgaagctacacaagtaaaagaaagtaaagataaaaaagataaaaaa
gtgatgattataggtggtgggccaaaccgcataggacaaggcattgagtttgattatgct
tgtgtgcatgcttcttttgctctaaaagatatgggcgtaaaaactataatgtataattgt
aatccagaaacggtttcgacagattatgacacaagtgatattttatactttgagccgatt
gattttgagcatttaagagcggttattgatagagaaagaccagatggagtgatagtgcat
tttggtggtcaaactccgcttaaatttgcaaaacgccttagtgcttttggagcaaagatt
ataggaacaagtgcaagagtgatagatttagctgaagatagaaagaaatttgctaaattt
atcgaagatttaggcataaatcaacctaaaaatggcacagctataagtgtagaagaagcg
attataaaagcaaatgagataggttatcctgtgcttgttagaccaagctatgttttgggt
ggtcgcgcaatgcgtgttgtacatgatgagagtgagcttagactttatatgcaagaagct
gtagatgtgagtgataaatccccggtattaatcgatcaattcttagacaatgctactgaa
cttgatgtagatgcgataagtgatggaaaagaagtttatgtagcaggtattatggagcat
attgaagaagcaggaattcactcaggcgatagtgcttgctctttacctgccgtaaatatt
gatgaagctatgcttgaaatgattgagcaaaaaacaaaagatattgctttaaatttagga
gtagtagggcttttaaatatacaatttgctatccatgataataaactttatatgatagaa
gtaaacccaagagctagtagaactgtgccttttgtgagtaaggctacaggaattccttta
gctaaggttgcaacacgcgtgatgtggcaaggaaatttaagagaaagtttgaaattttat
gatacctttaaagtggtagaagaaaaaaacggaattttaagagctaaaaaaccaaaacac
attagtgtaaaatcagtggtatttccttttgcaaaacttagtggaagtgaccttgagctt
gggcctgaaatgcgctcaaccggcgaagttatgggtgtaagcaaagactttgaaaactct
tacgcaaaaagccaacttgcttcttcaaatttcttaccagaaagtggcaatgtattttta
tcactaagagaacaagataaaaaatacgcagtagatttagctaatgaatacattaagcta
ggatttaaaatcattgctacaagtggaacttataaaattttacaagaagcaggtttagag
tgtgagtttgtgcataaaatttctgaagggcgcccaaatgtagaggataagttaaaaaat
tctcaaattcaacttgctattaatacaagcgatgagcatagctttaaaggtgatactaaa
aaaattagagcaaatattttacgctttaaaaccccgtattttacaaacctaagagcagcg
tatgcaggtgctaaagcgattaaagctatacaaaataaatcatgtcttgaagtaaagagc
ttgcaagaatacttaaaagcatga
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