Campylobacter lari NCTC 11845: UPTC3659_0114
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Entry
UPTC3659_0114 CDS
T03552
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cln
Campylobacter lari NCTC 11845
Pathway
cln03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cln00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UPTC3659_0114 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cln03021
]
UPTC3659_0114 (rpoA)
03400 DNA repair and recombination proteins [BR:
cln03400
]
UPTC3659_0114 (rpoA)
Enzymes [BR:
cln01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UPTC3659_0114 (rpoA)
Transcription machinery [BR:
cln03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
UPTC3659_0114 (rpoA)
DNA repair and recombination proteins [BR:
cln03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
UPTC3659_0114 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AJD01004
UniProt:
A0A0A8HSU4
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All DBs
Position
96629..97642
Genome browser
AA seq
337 aa
AA seq
DB search
MRHITTSAYTPTEFSIENISDTVAKVSAWPFEIGYAITLAHPLRRLLYSSTVGFAPTGVK
IKGVAHEFDSMRGMLEDVALFIINLKKLRFKLKTDSEKEIVTFSFKGPKEICGKDLDNEI
VEVVNADSYLATINEDADLEFTLIIEKGIGYVPSEEIQNFLDSEFIALDAFFTPVKHAVY
DIEKVLFEDNPDYEKVVFTITTDGQISPSDAFKNALEAMYKQLSVFDKITNAQNAVRSQA
LNNEVEHVKLLQNITELNLSARSFNCLEKANVVYIGELALMSVSELADLKNLGKKSLDEI
KSVMESIDFPIGNSKLSDSAKETLKRKITELKAQNEG
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagacatattacaacttctgcttatacaccaacagagtttagtattgaaaatatcagt
gatacagtggcaaaagtaagtgcatggccttttgaaatcggctatgctattactttggcg
catcctttgcgtcgtttactttattcaagcacagtaggttttgctccaacaggagttaaa
atcaaaggcgtagcgcatgaatttgatagtatgcgtggtatgcttgaagatgtagcattg
tttattatcaatctaaaaaaattaagatttaaactaaaaacagattctgaaaaagaaatc
gtaacttttagttttaaaggaccaaaagaaatttgcggaaaagacttagacaatgaaatt
gttgaagttgtgaatgcagatagctatcttgcaacgattaatgaagatgcagatttagaa
tttaccttaattattgaaaaaggtataggttatgtgccttctgaagaaattcaaaatttc
ttagattctgagtttatagcacttgatgcattctttactcctgtaaaacatgcagtttat
gatatagaaaaagtgctttttgaggataatccagattatgagaaagttgtttttacaatc
acaactgatggtcaaatctcaccaagtgatgcttttaaaaatgctttagaagcaatgtat
aaacaattgtcagtgtttgataaaattactaatgcacaaaatgctgtaagaagtcaagca
ttaaacaatgaagtagaacatgtaaaattacttcaaaatataactgagttaaatttaagt
gctagaagctttaattgcttagaaaaagcaaatgtggtttacattggtgagcttgccttg
atgagtgtcagtgaactcgcagacttaaaaaatttgggaaaaaaatctttagatgagatt
aaaagtgtaatggagtctatagatttccctataggaaattcaaaacttagtgatagtgca
aaagaaacgctaaaaagaaaaattacagaattaaaagcacaaaatgaaggataa
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