Campylobacter lari NCTC 11845: UPTC3659_0179
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Entry
UPTC3659_0179 CDS
T03552
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cln
Campylobacter lari NCTC 11845
Brite
KEGG Orthology (KO) [BR:
cln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cln03032
]
UPTC3659_0179 (topA)
03400 DNA repair and recombination proteins [BR:
cln03400
]
UPTC3659_0179 (topA)
Enzymes [BR:
cln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
UPTC3659_0179 (topA)
DNA replication proteins [BR:
cln03032
]
Prokaryotic type
DNA Topoisomerases
UPTC3659_0179 (topA)
DNA repair and recombination proteins [BR:
cln03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UPTC3659_0179 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
DUF1272
Toprim_2
DUF3653
Motif
Other DBs
NCBI-ProteinID:
AJD01065
UniProt:
A0A0A8HWB1
LinkDB
All DBs
Position
complement(154019..156103)
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AA seq
694 aa
AA seq
DB search
MKNLIIVESPAKAKTIGNFLGKDYEVIASKGHIRDLPKTSFGIKIEDENFKPEYRISNDH
SSLVKELKEKAKKAKTIYLATDEDREGEAIAYHIAKAINKDENSLPRIVFHEITKSAIEN
ALKNPRSLNVNSVNAQQTRRLLDRIVGYKLSPLLNQKIQKGLSAGRVQSAALKIIVDRER
EIKAFIPLKYFSIDVIFEKDLQAELVEFQNQKIEKLSLTNEDRAKLIFEACKNANFKIKD
IESKDRKIAPQAPFMTSTLQQSASNRLGFNPKKTMMIAQKLYEGVKTHQGIMGVITYMRT
DSLNIAKEALEEVRKLIKNDFGKEYLPSKANIYTTKSKGAQEAHEAIRPTNLSFTPKLAS
EFLEKDEARLYTLIYNRFLASQMNPAISQTQNVYVKSNEASFKISGRKILFDGHYKVYGD
MDKDKILPNLKLEDTLNIQNIELSSHFTEPPSRYSEAGLVKKLENLGIGRPSTYAPTISL
LSAREYVHIDKKQIIPNEIAFVVTEVLEQNFSDIVDSDFTSKMEDKLDIIAEGKIDWQEV
LREFYFPFMRKIDEGKKNIKSQKTFTKLDETCPDCGGELAIRKGRYGEFIACLNFPKCKY
SRNLKQETQNEEKSEKKLNTIGVKCPSCQEGEIVERFSKRGKFYGCSAYPKCNYISKYKP
SEEKCSKCGETLIIKELKKGTFLECLKCKIKKEI
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatttaatcatagtagaatcacctgctaaagctaaaaccataggtaattttcta
ggcaaagactatgaagtaatagcctctaaaggccacattagagatttacctaaaactagc
tttggcataaaaatagaagatgaaaattttaaacccgaatatagaatatcaaatgatcat
tcaagcttagtaaaagaactcaaagaaaaggctaaaaaagctaaaaccatctaccttgca
accgatgaggaccgcgagggtgaagccatagcttatcatatagctaaggctattaataaa
gatgaaaattccctaccacgcatagtttttcatgagattactaaaagtgctatagaaaat
gctttaaaaaatccgagatctttaaatgtaaatagtgtcaatgctcaacaaaccagacgc
ttacttgatcgcatagtaggttataaactaagtcctttactcaatcaaaaaattcaaaaa
ggcctaagcgcagggcgtgtgcaaagtgcggctttaaaaatcatcgtcgatagagaaaga
gaaataaaagcttttattcctttaaaatactttagtatagatgtgatttttgaaaaagac
ttgcaagctgaattagttgagtttcaaaatcaaaagatagaaaaattaagtttaactaac
gaagatagagccaaactcatctttgaagcttgcaaaaatgctaactttaaaataaaagat
atagaaagtaaagatagaaaaatagctccacaagcaccttttatgacctcaaccctacaa
caaagtgcgagcaatcgcctaggttttaaccctaaaaaaaccatgatgattgcccaaaaa
ctttatgagggcgtaaaaactcatcaaggcattatgggtgtgattacttacatgagaact
gatagcttaaatatcgcaaaagaagctttagaagaagtaagaaaacttatcaaaaatgat
tttggcaaagaatacttaccaagcaaggcaaatatttacaccactaaaagcaaaggtgcc
caagaagcacatgaagctataaggccaactaatcttagctttactccaaaacttgcaagt
gagtttttagaaaaagacgaagcaagattatatactttaatatacaatcgtttcctagct
tcacaaatgaatcctgctatatctcaaactcaaaatgtctatgtaaaatcaaatgaagca
agttttaaaataagtggtagaaaaattttatttgatgggcattataaagtatatggagat
atggacaaagataaaattttacctaatttaaaactagaagatacattaaatatccaaaat
atagaattaagctcacattttaccgagccaccttcaagatactctgaagctgggcttgtt
aaaaagctagaaaatcttggcataggacgcccttcaacttatgctccaaccatctcttta
cttagtgcaagagaatatgtgcatatagataaaaaacaaatcatacctaatgaaatagcc
tttgttgtaacagaagttttagagcaaaactttagcgatatagtagatagtgattttact
tctaaaatggaagataaacttgacatcattgcagaaggtaaaatagactggcaagaagtt
ttaagagagttttattttccttttatgagaaaaattgatgagggtaaaaaaaatataaaa
agtcaaaaaacttttacaaaattagatgaaacctgccctgattgtggtggtgagcttgct
ataagaaaaggaagatatggagaatttatagcttgtttaaattttccaaaatgtaaatac
tcaagaaatttaaaacaagaaacacaaaatgaagaaaaaagcgagaaaaagctcaatacc
ataggcgtaaaatgcccaagctgtcaagaaggcgagattgtggagcgtttttctaagcgt
ggtaaattttatggctgtagtgcttatccaaaatgcaactatataagcaaatacaaacca
agtgaagaaaaatgtagcaaatgtggcgaaactttaatcataaaagagcttaaaaaaggc
acatttttagagtgcttaaaatgcaaaatcaaaaaggaaatttaa
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