Campylobacter lari NCTC 11845: UPTC3659_0422
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Entry
UPTC3659_0422 CDS
T03552
Symbol
truD
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cln
Campylobacter lari NCTC 11845
Brite
KEGG Orthology (KO) [BR:
cln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cln03016
]
UPTC3659_0422 (truD)
Enzymes [BR:
cln01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
UPTC3659_0422 (truD)
Transfer RNA biogenesis [BR:
cln03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UPTC3659_0422 (truD)
Prokaryotic type
UPTC3659_0422 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
WYL_2
DUF2732
Motif
Other DBs
NCBI-ProteinID:
AJD01302
UniProt:
A0A0A8HU38
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All DBs
Position
403122..404246
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AA seq
374 aa
AA seq
DB search
MEENIIFKPLYTLKHSPINVYFSKNSNDFVVREKPLYEFSGKGEHLILHIQKKDLSTSEA
LKILSEQSGVKMKDFGYSGLKDKQGLTFQYISMPKKFEESLRNFKHDKMKILDSFYHDNK
LRIGHLKGNSFFIRLKKVSKVDALKIEQAFKNIQEQGFANYFGYQRFGKFQDNFSQGLEI
LKGKKIKNKKMQEFLISAFQSELFNRYLSKRVELSHFINDFSEKEIKQIYGLEKEEIKSL
KNQNQFFKILMGEVLGHYPFGKCFICEDLSSEVERFNQKDISAMGLLIGSKAYEANEGLA
KKLEDEVFSFAYEFKDKMQGSRRFMWSYLQDCKCHYDEEKAHFTLEFFLQKGSYATVVLE
EILHTDIFEQTHNI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaacatcatttttaaacccttatacactttaaagcacagcccaataaatgtg
tatttttcaaaaaatagtaatgattttgtagtaagggaaaagcctttgtatgaatttagt
ggcaaaggtgaacatttaattttacatatacaaaaaaaagatcttagtacaagtgaagct
ttgaaaattttaagtgagcaaagtggtgttaaaatgaaagattttggctatagtggttta
aaagataaacaaggtttaacttttcaatatatttctatgcctaaaaaatttgaagagagc
ttaagaaattttaaacatgataagatgaaaattttagatagcttttatcatgataataaa
cttagaataggacatttaaaaggaaattcattttttataagattaaaaaaagtttcaaaa
gtagatgctttaaaaatagaacaagcttttaaaaatatccaagaacaaggttttgctaat
tattttggatatcagcgttttggcaaatttcaagataatttttcacaaggactagaaatt
ttaaaaggcaaaaaaatcaaaaataaaaaaatgcaagaatttttaatttctgcttttcaa
agcgagctttttaatagatatttgagcaaaagggtagaattatcacattttattaatgat
tttagtgaaaaagaaataaagcaaatttatggtttagaaaaagaagaaatcaaaagttta
aaaaaccaaaaccaattttttaaaattttaatgggcgaggttttaggacattatcctttt
ggaaaatgctttatatgcgaagatttatcaagtgaagtagaaagatttaatcaaaaagat
attagcgcaatgggtcttttaataggctctaaagcttatgaagcaaatgaaggtctagct
aaaaaattagaagatgaagttttttcttttgcatatgagtttaaagataagatgcaaggt
tcaagacgctttatgtggtcttatttgcaagattgtaaatgtcattatgatgaagaaaaa
gctcattttactttggaatttttcttgcaaaaaggctcgtatgccacggtagttttagaa
gaaattttacatacagacatctttgagcaaacccataatatataa
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