Mageeibacillus indolicus: HMPREF0868_0089
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Entry
HMPREF0868_0089 CDS
T01181
Symbol
gyrB
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
clo
Mageeibacillus indolicus
Brite
KEGG Orthology (KO) [BR:
clo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clo03032
]
HMPREF0868_0089 (gyrB)
03400 DNA repair and recombination proteins [BR:
clo03400
]
HMPREF0868_0089 (gyrB)
Enzymes [BR:
clo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF0868_0089 (gyrB)
DNA replication proteins [BR:
clo03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0868_0089 (gyrB)
DNA repair and recombination proteins [BR:
clo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0868_0089 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ADC91163
UniProt:
D3QZT4
LinkDB
All DBs
Position
4311..6401
Genome browser
AA seq
696 aa
AA seq
DB search
MAKDIKKTDDNRENDEFLSENEENSDRLINLADNPCALVEDFSEKNDFAELEKNQDEFDT
SNNSKYSESDIQVLEGLEAVRKRPGMYIGDTTLRGLHHLVYEIVANSVDEALAGRCDMIY
LTINHDGSITVEDDGSGIPIGIHPTKGIPTVEVVHTILHAGGKFGGGAYSVSGGLHGVGA
SVVNALSEWMDVYVKREGNIYKISFARGVVTEPLKIIGHCPINETGTKTVFMPDKEIFPD
IHFNYDNMLTRYREMAFLNKEITIVFRDERPEEEVVEKVLHYDGGIISFVEYMNLHKEPL
FPKPIYFASSINNSYVEVALQYNNTYAENIYSYANNIATPEGGTHLTGFKSAITKVINDY
ARKYGFLKTNDKNLQGEDCREGLTCIVSVKLPEPQFEGQTKSKLGNSEMRTLVESMINDK
FPVFLEENPAIAKIIMEKCISASRARDAAKKAREMTRRKNTFDSVSLPGKLVDCQENDPT
LCEIFIVEGDSAGGNAKGGRERKYQAILPLWGKMLNVERSRVDKVYNNSKLSPIVMALGT
GIGDEFDLNKLRYNKVIIMADADVDGAHIRTLLLTFFFRHMKPLVEKGHVFIACPPLFKV
ENDNQVFYAYDEAGVEKIKQEQGWDKPKLQRYKGLGEMDAEQLWETTMNPATRKLLRVDL
EDAQSADQTFNLLMGEEVKPRKDFIQANAKYALLDN
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatattaaaaaaactgatgataaccgtgaaaatgatgaatttttgagtgaa
aatgaggaaaatagcgataggttaattaacttagctgataatccgtgtgctttagttgaa
gatttttccgaaaaaaatgattttgctgaattagaaaaaaatcaagatgaatttgataca
tctaataattctaaatatagtgaaagcgatattcaagttttggaaggtttagaggctgtt
cgtaaacgtccgggaatgtatataggtgacactacattaagaggtttacatcatcttgta
tatgaaattgttgctaattcagtagatgaagccttggcaggtcgttgcgatatgatttat
ttgactataaatcatgatggaagcattactgttgaagatgatggaagtggaattccaata
ggaattcatccaactaaaggtatacctactgttgaagttgttcatactatcctacatgcc
ggaggaaaatttggtggcggagcttatagtgtttccggtggccttcatggagttggtgct
tcggtagttaatgcactatctgagtggatggatgtgtatgtaaaacgtgaaggcaatatt
tataaaatttcatttgccagaggagttgttaccgaaccactaaaaataattggccactgt
ccaattaatgaaactggaacaaagacagtttttatgcctgataaagaaatttttccagat
attcatttcaactatgacaatatgttaacaaggtatagggagatggctttccttaataaa
gaaattactattgttttcagagatgaacgtccggaagaagaagtagtagaaaaagtgttg
cattatgatggaggaataatttcttttgttgagtatatgaacttacataaagaacctctt
ttccctaagcccatttactttgctagtagcataaataattcttatgttgaagtagcttta
cagtacaataatacttatgctgaaaatatttattcatatgcaaacaatattgctacacca
gaaggaggcacacatttaacaggatttaaatcagctattacaaaagtaataaatgattac
gcaagaaaatacggttttcttaagacgaatgacaaaaacttacaaggtgaggattgtcgc
gaaggtttaacatgtattgtaagcgttaaactacctgaacctcaatttgaaggtcaaact
aagtctaaacttggtaatagtgaaatgcgcaccttagtagaatccatgataaatgataaa
tttccggtatttttagaggaaaatccggcaattgctaaaattattatggaaaaatgtatt
tctgcttctcgggctcgggatgctgcaaaaaaggcacgagaaatgacacgcagaaaaaat
acttttgacagcgtttcacttcccggtaagttagtggattgtcaggaaaatgatccaaca
ttatgtgaaatattcattgttgagggtgactctgccggaggaaatgccaaaggcggtcgt
gaaagaaaatatcaagcaatattaccgttgtggggtaaaatgctcaatgttgaaagatct
cgagttgataaggtttacaacaattcaaaattatctcctatagtaatggctctaggaacc
ggtatcggtgatgaatttgatttgaataaattacgttataataaggttataattatggca
gatgctgatgttgatggtgcacacattcgtactctccttttgacttttttcttccggcat
atgaaacctttagttgaaaaaggacacgtttttattgcctgcccaccattatttaaagta
gaaaatgataatcaagttttttatgcgtatgatgaagccggcgttgaaaaaataaagcaa
gaacaaggatgggataaacctaaattgcagcgttacaaaggattaggcgaaatggatgca
gaacaattatgggaaacaacgatgaatccagctacgagaaaattattaagagtcgatctg
gaagatgcacaaagtgcagatcagacttttaatttattgatgggcgaagaagtaaaaccc
agaaaagattttattcaagccaatgcgaaatatgctttacttgataattaa
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