| Entry |
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| Symbol |
rpoC
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| Name |
(GenBank) DNA-directed RNA polymerase, beta' subunit
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| KO |
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| Organism |
clo Mageeibacillus indolicus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:clo00001]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HMPREF0868_0196 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:clo03021]
HMPREF0868_0196 (rpoC)
03400 DNA repair and recombination proteins [BR:clo03400]
HMPREF0868_0196 (rpoC)
Enzymes [BR:clo01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HMPREF0868_0196 (rpoC)
Transcription machinery [BR:clo03021]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HMPREF0868_0196 (rpoC)
DNA repair and recombination proteins [BR:clo03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HMPREF0868_0196 (rpoC)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1695486..1699190)
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| AA seq |
1234 aa
MSELQNIEAIGITLASPEAILSWSHGEVTKPETINYRTLKPERGGLFCEKIFGPTKDWEC
HCGKYKKIRYRGIVCDRCGVEVTRAKVRRERMGHIKLAAPVSHIWYFRGIPSRMGLILDI
SPRNLERVLYFASYVIIDPGTTGRLKYDLLTDSEYRELQNKYGRNSFRALMGAEAIKELL
QEIDLNVLADELRTELQTASGQKRVRIIKRLEVVESFKKSNNRPEWMILDVLPVLPPDLR
PMVQLDGGRFATSDLNDLYRRVINRNNRLSKLLSMGAPEIIVRNEKRMLQEAVDALIDNG
RRGRPVTGAGNRALKSLSDLLKGKQGRFRQNLLGKRVDYSGRSVIVIGPELKLHQCGLPK
EMAIELFKPFVMKRLVQDGYAHNIKTAKRMVERANDVVWDILEDVIKDQPVLLNRAPTLH
RLGIQAFEPILVEGRAIKLHPLVCTAYNADFDGDQMAVHLPLSAEAQAEARFLMLSANNL
LKPQDGKPVMVPTQDMILGCYYLTLLKPGEPGEGSAYSDLDEALMAYHEHCLGLHAKIKV
RMTKMVNGEKVTGLVESSLGRLLFNEILPQNLGYVDREVPENRLKPECDFLVGKKQLAKI
IERCIRVKGITGTAEILDKIKSMGYKFSTRSGISIGIFDMIVPEVKKKYLEEAEKKVDFI
NRQHQHGLLNEEGRKASVIKVWKQTTDDITEALKASLGEFNPIHMMSDSGARGSISQIKQ
LAGMRGNMADTSGATIEIPIKSNLREGMNVLEFFISSHGARKALSDTALKTADSGYLTRR
LVDVSQDIIIREDDCGTEDFVEVQELSEGAKKGSRRVVKPLEERIAGRYAGRDIHHPVTN
AILAYRNDLITVDMAEKIAAAGIKKVPIRCVLTCHSSQGVCAKCYGLNLASGKEAVIGEA
VGIMAAQSIGEPGTQLTMRTFHSGGIANSGDDITQGLPRVEELFEARKPKGQAVMSEVSG
VVHIESGKRKREVTVTTAEGEAMTYSISFGAPLLVVEGETVEAGDLLTDGSVNPHDIMKI
NGARGVERYIINEVVKVYNNNGVDINDKHIEIIARQMLRKYRVDDPGDTDLLTGSVVDMF
TYEEANQKAEAEGKQPADGKRILLGITKASLATDSFLSAASFQETTRVLTDAAVKGKIDP
LLGLKENVIIGTLIPAGTGLSHYRRLTPVPVIDENAEILAKYSDGKALNPKFINANALAA
DHPVHLHMAGKTIATEDGLACHLADLNGKSDYNS |
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| NT seq |
3705 nt +upstreamnt +downstreamnt
atgagtgaattgcagaatatagaggcaatcggcattaccctagcgtcaccggaagcaatt
ttgtcctggtcccacggcgaggtaaccaagccggaaacgattaactaccgtaccttgaaa
ccggagcgcggcggcctgttttgtgaaaaaatctttgggcctaccaaggactgggaatgt
cattgcggtaaatataagaaaattcgttatcgcggtatcgtctgcgatcgttgcggcgtt
gaggtaacaagggccaaagtacggcgggagcggatgggtcacattaaactggcagccccg
gtatcacatatttggtatttccgtggcatacccagccgtatggggctgattttggacatt
tcgccgcgtaatctggaaagagtactgtactttgccagctatgtcatcattgaccctggc
acgacggggcgattgaaatatgatctgttgaccgacagtgaatatcgggaattgcagaac
aagtacgggcgcaattctttccgggctttgatgggcgcggaagcgatcaaggaattgtta
caggaaatagatttgaatgttctcgcggatgaacttcgtactgagttgcagacggcctcc
ggtcaaaagcgggtgcggataattaagcgtttggaagttgttgaatctttcaaaaaatct
aacaaccggccggaatggatgattctggatgtattgccagttttgccaccggatttgcgg
ccgatggtgcagttggatggcggcaggttcgctacctcagacttaaatgatttgtaccgt
cgggtaatcaatcgtaacaatcgtttgtccaagctcttgagcatgggtgccccagagata
atcgtgcgtaatgaaaagcgtatgttgcaagaggcagttgatgctttgatcgataacggc
cggcgtgggcgtccggttaccggtgccggtaatcgtgctttgaaatcgttgtcggatttg
ctaaagggcaagcaagggcgtttccgccaaaacttgttgggtaagcgggttgactattcc
gggcgttcggttatcgttatcgggccggagctgaagttgcatcaatgcggcttgccgaag
gagatggcgattgaactgtttaaaccgttcgtgatgaaacgtttggtgcaggacgggtac
gcgcacaatattaaaacggctaagcgcatggttgaacgtgctaatgatgtcgtttgggat
attttggaagatgtaattaaggatcagccggtattgctgaaccgtgcgccgacgttgcac
cgtttgggcattcaggcctttgagccgattttggttgaaggccgggctattaagctgcat
cctctggtatgtacggcttacaacgccgactttgacggcgatcagatggcggtacactta
cctttgtcggcggaggcacaggcggaagcacggttcttgatgctgtcggctaacaacttg
ttgaaacctcaagacggtaaaccggttatggtgccgacccaagatatgattcttggctgc
tattatttgaccttgctgaaaccgggcgagccgggtgaaggcagtgcgtactctgatttg
gacgaagctttgatggcttatcacgagcattgtctgggcttgcacgctaaaatcaaggtg
cggatgacgaaaatggtgaacggagaaaaggtaaccggcttggtcgagtcttcactcggg
cggttgttgttcaatgaaattttgccgcaaaacctgggctatgtcgatcgcgaagttccg
gaaaaccgtttgaaaccggaatgtgatttcctggtcggtaaaaagcagttggccaaaata
attgaacgctgcataagagtcaaggggattactggcacggcggaaattttggataaaatt
aaatccatgggttataagttctctactcgttcaggtatttccataggtattttcgacatg
atcgtgcctgaggttaagaaaaagtacttggaggaggccgaaaagaaggtagatttcatc
aatcggcagcatcagcacggtttgttgaacgaagaggggcgtaaagcttcggttatcaag
gtctggaaacagacgacggacgatatcacggaggcgttgaaagcaagcttgggtgaattc
aacccgattcatatgatgtccgattccggtgcccgtggttcaatttctcagatcaagcag
ctggccggtatgcgtggtaacatggccgatacatcaggtgcgacgattgaaattccgatc
aagtctaacttgcgggaaggcatgaacgtgttggaattctttatttcttctcacggcgct
cgtaaagctttgtcagatacggctttgaagacggccgactcaggttatttgacccgtcgt
ttggttgatgtttcgcaggatattattattcgggaagatgattgtggtacggaggacttt
gtcgaggtacaggaactttccgaaggtgctaagaagggttcgcgccgggttgtaaaacct
ttggaggaaagaattgctgggcgttatgctggtagggatattcatcatccggtcacgaac
gcgattttggcttatcgcaatgatttgatcacggtggatatggcggaaaaaatcgctgca
gccggtatcaaaaaagttccgatccgttgcgtcttgacttgtcattccagtcagggcgtc
tgtgctaaatgctacggcttgaacctggcctcgggtaaagaagcggtcatcggtgaggcg
gtcggcatcatggcggcgcagtcaatcggtgagccaggaactcagctgacgatgcgtacg
ttccactcgggtggtatcgctaactcgggcgatgatataactcaaggtttgccacgtgtt
gaggaattgtttgaagcacgtaaacctaaggggcaagcagtcatgtctgaggtttcgggt
gttgtccacattgagagcggtaagcgtaagcgtgaagttaccgtcactaccgccgagggt
gaagcaatgacctacagtatttctttcggcgcaccgttgctggtggtagaaggtgaaacg
gttgaggccggggatttgttgacggatggttcggttaacccgcacgatatcatgaaaatc
aatggcgcacgtggtgtggagcggtacataatcaacgaagttgttaaggtctacaataac
aacggtgttgatatcaacgataagcatattgaaataattgcgcggcaaatgttgcggaag
tatcgggtggatgatccgggcgacaccgatttgttgaccgggtcggtggtcgacatgttt
acttacgaagaagcaaatcaaaaagcagaagcggagggtaagcagccggctgacggtaag
cggattctgctcggtataactaaggcttcacttgctacggattctttcctttcggcggct
tcgttccaagaaacgacaagagtgcttactgatgcagcggttaagggtaagattgatcca
ttgctcggcttaaaggaaaatgtcatcatcggtacacttattccggccggtacgggcttg
agtcattatcgtcgtctgacccctgtgccagtgattgatgagaatgcggagatccttgcc
aagtatagtgatgggaaagctttgaatccaaaatttataaatgcgaatgcgcttgcggct
gatcacccggttcatttgcatatggctggcaagacgatagctacggaggacgggctggct
tgtcatttagctgatctaaacggcaagtcggattataattcttaa |
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