Mageeibacillus indolicus: HMPREF0868_0252
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Entry
HMPREF0868_0252 CDS
T01181
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
clo
Mageeibacillus indolicus
Brite
KEGG Orthology (KO) [BR:
clo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clo03016
]
HMPREF0868_0252 (truB)
Enzymes [BR:
clo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HMPREF0868_0252 (truB)
Transfer RNA biogenesis [BR:
clo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HMPREF0868_0252 (truB)
Prokaryotic type
HMPREF0868_0252 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ADC91643
UniProt:
D3R083
LinkDB
All DBs
Position
complement(1617418..1618560)
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AA seq
380 aa
AA seq
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METQGIINIYKPVGMTSFDVVNRLRRLTSIKRIGHCGTLDPFAEGCLPICLGRATAAVRF
MDGYDKSYSATLVLGASTDSGDCTGRLTDADSRIAEKWSTWQAADGETIRRAVANLTGEQ
MQVPPMYSAVKVNGRPLYKAARQGLDIPRSARKINVYAAALADYGLTSIPDLPDKIGATE
LNFKAADGPEAAEWPWLRLNLDVSKGTYVRAWAEQLAEALGTCGHLIALERTRCGPFTSA
DAVRLVDLTTENWQNFLLPSETAIQTFPRLDLEYRQGEDLINGKHLPVAWLSAEQQAILR
QIRVRSKEAASLQGSGADICGETAGDSEFVAMFYKDCFLGMGFPAEEKPQSYHRGLAATQ
ATIKVLCPERIFIAREDYRN
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcagggtataataaatatatataagcctgtcgggatgacttcatttgatgtc
gttaatcggttgcgccgtttgacgagcattaagcgtatcggacattgcggcactcttgat
ccttttgctgagggttgtttaccgatttgcttgggtcgggcgactgcagcggtaagattc
atggacggttatgataaaagctattcggcaactttggtgcttggtgcgtctacggatagc
ggcgactgtaccggtcggctgacggatgctgattctcgtatcgcagaaaaatggtctact
tggcaggccgcggacggggagactattcgtcgggctgttgctaacttgactggtgagcaa
atgcaggtcccgccaatgtattcggcggtcaaagtcaacggaaggccgctttacaaagca
gcccggcaaggcttggatattcctcgttctgcccgtaaaataaatgtttatgcggctgct
ctggcggattacggcctgacttcaattccggatttgcctgacaaaattggggcgacagaa
ttgaactttaaagccgcggacggtcctgaagcggcagaatggccgtggttgcggttaaac
ttagacgtgtcaaaagggacatatgtcagggcgtgggcggaacaactggccgaggcactt
ggtacctgtgggcatttgatcgccttggaacgtacccgctgcggcccgtttacgtctgcg
gatgcggtaagactggttgatctaaccacggaaaactggcaaaattttttgttaccatcg
gaaaccgcgatacagacttttccacggctggatttggaatatcggcaaggagaagacttg
atcaacggcaagcacttaccggtagcttggcttagtgctgaacagcaggcgattttgcgg
caaatcagagtaaggtctaaggaggcggcttcgctccaagggtctggagcagatatttgt
ggggagacggccggcgactcggagtttgttgccatgttttataaagactgcttcctcggc
atgggtttcccggctgaagagaagccgcaaagttatcaccgtggccttgccgcgacgcag
gcgacaatcaaggtattatgcccggaaaggatttttattgctcgtgaagattatcgaaac
tga
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