Entry |
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Name |
(GenBank) UvrD/REP helicase
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KO |
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Organism |
clo Mageeibacillus indolicus
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:clo00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0868_0495
03430 Mismatch repair
HMPREF0868_0495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:clo03400]
HMPREF0868_0495
Enzymes [BR:clo01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0868_0495
DNA repair and recombination proteins [BR:clo03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0868_0495
MMR (mismatch excision repair)
Other MMR factors
HMPREF0868_0495
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
complement(1315804..1318353)
|
AA seq |
849 aa
MAFDFDADFKPAAPFTGLDDPATADSLSFNGGIAQNKTDLLAGLNEPQKKAVLHKDGPLL
ILAGAGSGKTKVITHRIAYLVEHENVPASSILAITFTNKAAQEMRQRIIKLIGNRVQGMW
VGTFHAMFLRILRNHAELLGFTKRFTVADTDDQLKMIKACLDELEFNDKSFPPRQVLSMI
SKAKNLLQNPDDYRLSGKGNYFINRVADVYRLYAAKLQSADAMDFDDILYYAVRLFTEHK
DVRYHYCQLFNYILVDEYQDTNGAQYRLIKLLTSGKNNLCVVGDDDQSIYSFRGADITNI
LNFEKDFPACEVIKLEQNYRSTESILGAANAIIAHNTERKDKTLWTAKAGGNKIKLLNLA
NQDAEAKYVAAQIIDMRRADPTLNYSDFAILYRLNALSRSLEFALRDQGIEYRIYGSVRF
FDRKEIKDVLAYLRLLANPYDGISFSRIINVPRRGIGDITQAAVLNLAETASITPLEVCR
RAGDFPSLERAAYKLQTFAALMDELAASLQNAKTFAMFIDGVINDTGLQAEIINQAKKTG
EDPADRVANLQELVSDVVQFEHNPLPPDVVMLEAENDEVTTWSRSELLDAYLDRVALISG
NDQTEDADAVKLMTIHSAKGLEFANVFLIGMEEGIFPGFRSLETENGVEEERRLAYVAVT
RAMRRLFITMVRERMLYGRTSHEIPSRFVAEIPTEFLETQRIADANERHAAFGRTAAAGH
FTAGTGSFSTAATAGNSAASVYSASSGQIASSGRKPRPKTECSFQAVKAATLGALSDNLS
SPANPANPATGNILRPADLFVGQMVRHPRFGVGEIVSLSEVSNDAIVNINFADGKKRMLA
LSAKLTAAE |
NT seq |
2550 nt +upstreamnt +downstreamnt
atggcttttgattttgatgccgattttaaaccggccgctccgttcaccggcttagacgac
ccagcgacagctgacagcctgagttttaacgggggcatcgcacaaaataaaacagatttg
ctggccggactgaatgagccgcaaaaaaaagcagtattacataaggacggaccgttactc
atattagccggggctggctcgggcaaaaccaaagttataactcatcgcatagcttattta
gttgagcatgaaaatgtgccggcgtcatcgatcttggcgataacttttaccaacaaagcg
gctcaggagatgcgccaaagaattatcaagcttatcggcaaccgggtacaaggtatgtgg
gtaggcacatttcacgcaatgtttttgcgaatcttgcgcaaccacgccgaattgcttgga
tttaccaaacgttttacggtcgccgatacagatgatcagctcaaaatgattaaagcctgc
ttggatgagcttgaatttaatgacaaatcttttccgccgcggcaagtcctcagcatgatc
agcaaggccaaaaatctattgcaaaatccggacgactatcggctgagcggcaagggaaac
tactttatcaatcgagttgccgatgtttaccgcctctatgccgccaaactgcaatccgcc
gatgctatggattttgacgatattttgtattatgccgtgcggttgtttaccgaacacaaa
gatgttagatatcactactgccaattgtttaactacattttggtcgatgagtaccaggat
acgaacggcgcacaatatcgcctgattaaattgctgacttccggcaaaaataacctttgt
gtcgtcggtgatgatgaccaatccatctattcgttccgtggggcggacatcaccaatatt
ttaaattttgaaaaagatttcccggcctgcgaagtgatcaagcttgagcaaaactatcgt
tccacagagtcgattttgggcgcggccaatgccattatcgcccacaacacggaacgcaag
gacaaaactttgtggactgccaaggccggtggcaacaaaataaaactcctgaatcttgcc
aaccaagacgcggaagccaaatatgtagctgcccaaataatcgatatgcgacgcgccgat
ccgacgcttaattacagcgatttcgcgatcttgtaccggctcaacgccctttcccgttcc
ttagaatttgctttgcgtgatcagggaattgaatatcgtatatatggttcggttcgtttc
ttcgaccgcaaagagattaaagatgtgctggcttatttgcgtctcttggccaatccttac
gatggcatctctttcagccggatcatcaatgttccgcgccgcggcatcggggacattact
caggcagcggtgcttaatctggctgaaacggcctcaataaccccactagaagtttgccgg
cgggccggagatttcccgagcctggaacgtgcggcttataagttgcagacgtttgcagca
ttgatggatgagctggcggcttctttacaaaatgctaaaacatttgccatgttcattgac
ggagttatcaatgataccggcttgcaggcggaaattattaatcaggccaaaaaaaccggt
gaagacccggcagatcgtgtggccaacctgcaagagctggtttccgacgtcgtgcaattt
gagcataatcctttgccgccggatgtcgtcatgctggaagccgaaaacgatgaagttacc
acttggagccgcagcgaattgctggatgcctacttggatcgtgttgccctcatatccggt
aacgaccaaaccgaagacgcggatgcggtaaaattgatgacgattcacagtgccaagggc
ttggagtttgccaatgtatttttgatcggaatggaagagggcatattccccggcttccgt
tctttggagacagaaaatggggtggaagaggagcgtcggctggcctatgttgcggtgaca
cgggctatgcgccgtctattcataaccatggtcagggaaagaatgctttatgggcggacc
tcacatgagattccgtcccgatttgttgcggaaattccgaccgaatttttggaaacgcaa
cgcattgctgacgcaaacgaacgacatgccgcgtttgggcgcaccgctgcagctgggcat
tttaccgccggcacaggttctttttccacagctgctacagccggaaattccgcggcatcg
gtatattccgcttcatccgggcagatagcctcgtctgggcgcaaaccacggccgaaaacc
gagtgcagttttcaagcggtaaaagcagcgacgctcggggcgttaagcgacaatctctcc
agtcctgcaaatcctgcaaatcctgcgacgggcaatattttacggccggccgaccttttt
gtcggtcaaatggttagacatccgcgcttcggggttggcgaaatagttagcttgagtgag
gtcagcaacgatgctatcgtcaatattaattttgctgacggaaaaaagcggatgttggca
ttaagtgccaaacttactgcggctgaatag |