Mageeibacillus indolicus: HMPREF0868_0619
Help
Entry
HMPREF0868_0619 CDS
T01181
Symbol
uvrB
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
clo
Mageeibacillus indolicus
Pathway
clo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0868_0619 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clo03400
]
HMPREF0868_0619 (uvrB)
DNA repair and recombination proteins [BR:
clo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0868_0619 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMPREF0868_0619 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
AAA_22
DUF87
UB2H
Tam41_Mmp37
AAA_5
Motif
Other DBs
NCBI-ProteinID:
ADC90719
UniProt:
D3R185
LinkDB
All DBs
Position
complement(1182186..1184417)
Genome browser
AA seq
743 aa
AA seq
DB search
MEFKLHAPFQPTGDQPAAIEALTAGFTAGRRAQTLLGVTGSGKTFTMANIIARLQRPTLV
LAPNKTLSGQLCAEFKAFFPENAVEYFVSYYDFYQPEAYIAATDTYIEKDSAINDEIDRM
RHSATASLLERRDVIVVASVSCIYGLGDPYTYKHLMVHLREGATKNRDEVIRELVDIQYQ
RNDYDCRRGTFRVRGDSLDIYPISSDKIILRISFFDDEIDRIAEVDALTGKTLALRNYVL
IYPASHYATSRAKIMGALSDIEQELTARVKELRAEGKIMEAYRLEQRTRYDMDMLLETGF
VKGIENYSRFLDGRKPGVPPYTLLDFFPEDYLLMIDESHVTVPQIGAMYAGDRSRKEALV
DYGFRLPAAFDNRPLKFNEFERKMGQTLFVSATPGKYEAQHSEFVQEQVIRPTGLLDPPI
EIHPVDGQIEDMLAAIKKKTAVGERTLVLTLTKKMSEDLTEFFSSAGLKVKYLHSDIANE
ERLRILKELREGEFDVLVGINLLREGIDLPEVGLLAILDADKEGFLRSATSLIQIIGRVA
RNVNGKVIMYADSITAAMQNAVDETNRRRRIQATYNQIHNITPHTVVKEIRELPDTYSVT
SPKASQREHERAAMSEPAMNESAMNEPDTNPYLHKAVAKTAAAAVTSVIDGATAASTAKP
TAKPSTKPTAKPSATSQAPTFAELTEFLRRGDLKHFEKSACVLSPKEKAKLLKQLQKLMR
QSATRTEYEQAAVYRDAIQSLMC
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggaatttaagttacatgcgccgtttcagccgacaggtgatcagcctgcggctattgaa
gccttgacggccggtttcaccgccggccgccgggctcaaactttactcggcgttaccgga
tccggcaaaactttcaccatggctaatattattgctcgtctgcaacgtcccacgctcgtg
ctggctcccaacaaaactttgagcggccagctttgtgcggagtttaaagctttcttcccg
gaaaatgcagttgaatattttgtcagttactatgatttttaccagccggaagcttatatt
gccgccacggacacgtatatcgaaaaggattcggcgataaatgatgagattgatcggatg
cgtcattcagccaccgcgtcattgctagaacgtcgcgatgtaatcgttgtggcgtcagtt
tcctgcatttacggccttggtgatccgtatacctataagcatttaatggtgcatttgcgc
gaaggtgcgacaaaaaatcgtgacgaagtgatccgggaattggttgatattcagtatcag
cgcaacgattatgactgccggcgtggcacatttcgcgtgcgcggcgatagccttgatatc
tatcctatttcatcagataaaataattttgcggatttctttttttgatgatgaaatcgat
cggattgccgaagtggatgcattgactggtaaaacgctggctctgcgcaactatgtgctt
atatatcctgctagtcattatgccacttcacgcgccaaaattatgggagctttatcggac
attgagcaggaacttacggcacgggttaaggaactgcgagcggaaggcaaaatcatggag
gcctatcgtttagaacaaagaacgcgatatgacatggacatgcttttggaaaccggtttc
gttaaaggtatagagaactattcgcgttttttggatgggcgtaaacctggtgtgcctccc
tatactttgctggatttctttcccgaagattatttacttatgatcgatgaatctcacgtt
actgtgccgcagattggcgcgatgtatgccggagatcgctcacgtaaagaagctctggtg
gactacggttttcggctgcccgccgcatttgataatcgtccgctaaaatttaacgaattc
gagcgtaaaatggggcagactcttttcgtttcggctactcctggaaaatacgaggcgcaa
cacagcgaatttgtgcaagaacaggttattcgtccgacaggcttgctggatcctccgatc
gagatacatccggttgacggtcaaatagaagatatgttggcggctatcaagaaaaaaacg
gcggtcggtgaacgaactttggttcttactttgaccaaaaaaatgtcggaagatttaacg
gaattttttagttctgccgggttaaaagttaagtatcttcattccgatatagctaacgaa
gagcgtttgcgaatcttgaaagaattgcgggagggagagtttgacgttctggtcggaatc
aacctcctgagggaaggtattgatttgccggaagtaggcttgctggcaattttggatgcg
gataaagagggctttttgcgctcggccacatccttgattcagatcatcggtagagttgcc
agaaatgtcaacggaaaagttattatgtacgcagacagtattactgcggccatgcagaat
gctgtcgatgaaaccaatcgtcggcggcgtattcaagctacttataatcagatccataat
ataacgccgcatacagtagttaaggaaatcagagagttgccggacacttattcagttaca
tctccgaaggcgtcacagcgggaacatgagcgtgcggcgatgagtgaaccggcgatgaac
gaatcggcgatgaacgaaccggatacgaatccttatctccataaggctgtggcaaaaacg
gccgcagcagcggtaaccagtgttattgatggggcaactgccgcatctacagccaaacct
acagctaagccgtcaactaaacctacagctaaaccgtcagccacttcccaagctcctact
tttgccgagttgactgaatttttgcgccgaggcgacttaaagcactttgaaaaatcagct
tgcgttttatcgcctaaagaaaaagctaaattgttgaaacaattgcaaaaactgatgcgt
cagtcggcaacgcgaaccgaatatgaacaggccgcggtttaccgagatgctattcaaagt
ttaatgtgttaa
DBGET
integrated database retrieval system
