Mageeibacillus indolicus: HMPREF0868_0895
Help
Entry
HMPREF0868_0895 CDS
T01181
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
clo
Mageeibacillus indolicus
Pathway
clo03030
DNA replication
clo03430
Mismatch repair
clo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0868_0895 (holA)
03430 Mismatch repair
HMPREF0868_0895 (holA)
03440 Homologous recombination
HMPREF0868_0895 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clo03032
]
HMPREF0868_0895 (holA)
03400 DNA repair and recombination proteins [BR:
clo03400
]
HMPREF0868_0895 (holA)
Enzymes [BR:
clo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0868_0895 (holA)
DNA replication proteins [BR:
clo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0868_0895 (holA)
DNA repair and recombination proteins [BR:
clo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0868_0895 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delt_C
Motif
Other DBs
NCBI-ProteinID:
ADC90664
UniProt:
D3R201
LinkDB
All DBs
Position
869391..870431
Genome browser
AA seq
346 aa
AA seq
DB search
MAKVKTSNEYDYRKLIVDLRRGEGKSLYLLAGEETYLIRSLLKELQKTFISPGAEDLDVF
KYDSQSSENKLSPKVLIEQIKTPAFISARRLFILRRTGWFNGSVPFAEQLIDMFKSLDDT
VCLVFWEEKVDNRQKKLLDAVRKYGIYGVLNRQTVQELSRWLSGFFAKYKLNISRAAAEK
LISVAQSDMFTLMNEVNKITLYCQATAQTEVSEALLDLVSPPDLAGNIFQLNDTLLSGRS
DRAINLLHKLLVQPQPPLLILFMLARHIKQLIIVKSITNREEAAAALHIPGFALDKLYRQ
SSAYSLEKLVKIYNNCYLSDRAIKNGDLDEVLALELLITSFIPKWV
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtaaaaacaagcaatgaatatgactatagaaaactaattgtcgatttgagg
cgaggtgaggggaagtctctatatcttttggccggagaagagacttatttgatccgcagt
ctgctcaaagaattacagaaaactttcatttcacccggggccgaagacttagacgttttt
aaatatgacagtcagtcttccgaaaacaagttgagccctaaggttctgattgaacagatt
aaaacaccggcttttatctcggcaagacgcttatttattttgcgccgtacgggttggttc
aacggtagcgtcccttttgccgaacaacttatagatatgtttaagtcactggatgacact
gtatgtctcgtattttgggaagaaaaagttgataaccgtcaaaagaaattgcttgacgcg
gtgcgcaaatatggtatttacggcgttttgaaccgccaaactgttcaagaacttagccgt
tggctgagcggtttttttgccaaatataaactaaacatcagccgtgccgcggccgaaaaa
cttatttcggttgcacagtctgatatgtttacactgatgaatgaagttaacaaaattacc
ctttattgccaggccacggcgcaaactgaagttagtgaagcattgctagaccttgtttcg
ccgcccgacttggctggtaacatatttcagcttaacgacacattattaagcggccggagc
gatcgcgcgataaacctattgcacaagttgcttgttcagcctcagcctcctttactgatt
ttattcatgctggctcgccacataaaacagctgataattgtaaaaagcataaccaatcgc
gaagaagccgccgccgccttgcatatacccggattcgctctggataaattatatcggcaa
agttcagcatattcgcttgaaaagctggtcaaaatttacaacaactgttatttaagcgat
cgagccatcaagaacggtgatttagacgaagttttagcacttgaattattgataacatct
ttcattccaaaatgggtttaa
DBGET
integrated database retrieval system
