Mageeibacillus indolicus: HMPREF0868_1013
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Entry
HMPREF0868_1013 CDS
T01181
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
clo
Mageeibacillus indolicus
Pathway
clo03030
DNA replication
clo03430
Mismatch repair
clo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0868_1013
03430 Mismatch repair
HMPREF0868_1013
03440 Homologous recombination
HMPREF0868_1013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clo03032
]
HMPREF0868_1013
03400 DNA repair and recombination proteins [BR:
clo03400
]
HMPREF0868_1013
Enzymes [BR:
clo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0868_1013
DNA replication proteins [BR:
clo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0868_1013
DNA repair and recombination proteins [BR:
clo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0868_1013
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA_16
AAA
nSTAND3
nSTAND_NTPase5
KOW6_SPT51-2
TIP49
Motif
Other DBs
NCBI-ProteinID:
ADC91246
UniProt:
D3R2A7
LinkDB
All DBs
Position
740390..741439
Genome browser
AA seq
349 aa
AA seq
DB search
MDKALEINVNGRRQLVGRKDLRHSLATVLSDGRLRVVLLSGPPGSGKHVTALAAARYLLC
SEAYAKNTDLTVCENCSDCRYTASSTHPDLLDFYPTDQEKLIKTERVRAEICAEMPLSSR
RGGRRIFIIPADYLNETSQNVLLKSLENIPDLTYVILTASHSEAVLVTLRSRCTLFRMPR
LTETEMRELLSIYAIEIPELTEFRRIIGFADGNPGRVLDACSNDDFLPMQRETMHMLDDL
GHLDYGHLIIKYGDWLATHDFHLFADLLRYEVAEIIKNRFQVNIPDNEKVQDGFSLHGDS
VGRLNCSIDSLKKILNYIEDTESAIAGNVNTEIAFTRLILVLRKELINA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
ttggataaggccttagaaataaatgttaatggacgccgacaacttgtcggcaggaaagat
ttacgacatagtttggcgaccgtattgagcgatggacgcttgcgagttgtgcttttgagc
ggcccgccaggaagcggaaagcatgtcacggctttggccgcggcacgttatttgttgtgt
tcagaagcttatgctaaaaacaccgatttaaccgtttgcgaaaattgctctgactgcaga
tatacggctagttccactcacccggatttattggatttttatccgactgatcaggaaaaa
cttataaagacggaacgggtacgagctgaaatatgtgccgagatgccactttcatctaga
cgtgggggacggcgaatttttattattccggctgactacctaaatgaaacatcacagaat
gttttacttaaaagccttgaaaacattcctgatttgacctatgttatactaaccgcttct
cattctgaggctgttttggtaaccttaagatctcgttgtactttgttcaggatgccgcga
ttgacagaaactgaaatgcgtgaactcttgagtatatatgcaatcgagatccctgaatta
accgagttcagacggattatcggttttgctgacggtaatcccggtcgagtgctggatgca
tgcagtaatgatgatttcttgcccatgcaacgcgaaacaatgcatatgctggatgatctg
ggacatttggactacggtcatttgatcataaaatatggagattggttggcaactcatgac
tttcatttgttcgctgacttactgagatatgaagttgccgaaataattaaaaatcgtttt
caggtgaatataccagataatgagaaagtacaggatggtttttcgctccatggagattcc
gtgggacgattgaattgttctatagatagtttgaaaaaaattttaaactatattgaagat
accgagtcggctatagccggcaatgtaaatacggaaatagcatttacacgcctgatctta
gtgttgaggaaggagttaattaatgcctaa
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