Mageeibacillus indolicus: HMPREF0868_1338
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Entry
HMPREF0868_1338 CDS
T01181
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
clo
Mageeibacillus indolicus
Pathway
clo03410
Base excision repair
clo03430
Mismatch repair
clo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF0868_1338 (recJ)
03430 Mismatch repair
HMPREF0868_1338 (recJ)
03440 Homologous recombination
HMPREF0868_1338 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clo03400
]
HMPREF0868_1338 (recJ)
DNA repair and recombination proteins [BR:
clo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HMPREF0868_1338 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HMPREF0868_1338 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HMPREF0868_1338 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ADC90943
UniProt:
D3R343
LinkDB
All DBs
Position
411838..413994
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AA seq
718 aa
AA seq
DB search
MNLLKHKWTEAPQLPLPTEATKTVAAPLGLSEIIKASRMAETAAQAETTPVDLGEEWHSP
FLFNDMEKAVHTVADVIARHGIVMIHGDYDADGLTATAVLYRYLSQFGLEIYTYIPDRLE
EGYGLAAGGVKSALEHKVDLVITVDCGIVSHDEIAELSAAGILTVVTDHHNCRPTLPAAD
ACLNPKWPGESYPFPYLAGAGVALKLVQGMSEFFHQPEDVWRDLTDFAMIGTVADVMPLV
GENVAIVKEGLSRLNNRARAAWQILLNLPTDETITATTIGFRLAPLINAAGRMGCVSPAL
QIMLTDEADIAGEMAQKLQSLNEKRRELTQAVWTEVERQICENPLFLAAPILFVAGENWH
TGILGILAAKAAAEFNRPTFVLNREVDADGKVLYRGSGRTYGTIDLVATLNTLAPLLEAY
GGHRQAAGVTVTAAALAEIQALLAGKQQAAFTCTELAGLPELCERTPLPCDLEVDLSVCN
VTNWQELQNLQPFGESNPEPVLAWQGCTVLQLRKIGKQKQHLQLLLQDKAGRRIKGIFFG
GGYWADAITAPVKLDLLGVLQINTWQGLTEAQLRVVDIHLCLESLEKANLAVASEICASS
EPAVSDETGYLPRRISENPQAQKQFLAEVYRFLQRVLDQTWQLVDPAWLADVWSWHFKFK
FAGELVEKILTLFAESGILECKSWSAKNEHLYLIGLRQPHNKVKLSDLDAYHKLMHRW
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaatttactgaaacacaaatggacagaagctccgcaattacctttaccgactgaagcg
acgaagacggttgccgctccattaggcttaagcgagataataaaagcttcacgcatggct
gaaaccgcggcacaagctgagacgacgcccgttgacttgggtgaggaatggcacagtccc
tttttgtttaatgatatggagaaagccgtgcataccgttgccgacgtcatcgccaggcat
ggcatagttatgattcatggcgattatgatgcggacggattgacggccactgctgtttta
taccgctatttaagccaattcggtttggaaatatatacttacatacctgaccgtttggaa
gaaggctacggcttggctgctggcggtgtaaaaagtgctttagaacataaggtggattta
gtcataaccgtagactgcggtatcgtctcgcatgatgagattgctgaactttcggcggca
ggtattttgactgttgttactgaccaccataattgtcgtcctacattgccggctgccgat
gcctgtctcaaccctaaatggccgggggaaagttacccgttcccttatttggccggtgcc
ggggtggcattaaaacttgtgcaaggtatgagcgaatttttccatcaaccggaggatgta
tggcgagatttaaccgattttgccatgatcggtaccgtagctgatgtaatgccgttggtg
ggggaaaatgtcgctatagttaaggagggtctgtcacgacttaacaatcgagcccgtgcc
gcctggcaaattttgctcaatttaccgactgatgaaacaattaccgcgacaacgatcggc
tttaggttggctccattgataaatgctgccggccgaatggggtgtgtaagcccggctctg
caaatcatgctgaccgacgaggccgatattgccggggaaatggcacaaaaactacagtcg
ttgaatgaaaaaaggcgggagcttacgcaagctgtatggacggaagtagagcgtcaaatc
tgtgaaaatccgcttttcttggcggcacctatactatttgttgccggagaaaattggcac
accggtatattgggcatattggcagccaaagcggcagctgagtttaatcgcccgacattt
gttttgaatcgtgaagttgatgctgacggtaaggttttgtaccgcggttccggccggaca
tacggcacaattgatctagttgcgacgttgaataccttagccccgcttttagaagcatac
ggcgggcatcggcaagcggcaggcgttaccgttacggcagcggcgttggcagaaatacag
gcattattggccggaaagcaacaagctgcgtttacttgcacggaattggccggattgccg
gaattatgtgaaagaacaccacttccttgcgatttagaagtagatttatctgtttgtaat
gtgacaaattggcaagaacttcagaatttacaaccgttcggcgaaagtaatcccgagcca
gttttagcttggcaaggatgcaccgtattacagctgcgaaagataggaaagcaaaaacag
cacttacagctgcttttacaggataaagccggccgacggatcaaaggcatattttttggt
ggcggctattgggcggatgcgataacagcaccggtcaaactggatttgctgggcgtttta
caaattaatacttggcaaggcctgaccgaggcccaactgcgggttgttgacattcatcta
tgccttgagtcgcttgaaaaggcaaacttagctgttgcgtcggaaatttgtgcgtcctct
gaacctgccgtttcggatgaaacaggctatttaccgcgccggatcagcgagaatccgcaa
gctcaaaaacagtttttggcagaagtgtaccgttttctgcaacgagttttggaccagacg
tggcaattggttgacccggcttggctggcggacgtctggagttggcacttcaaatttaaa
tttgccggcgaactggtagaaaaaatacttacacttttcgctgaatcaggtatactggaa
tgtaaatcgtggtcggcaaagaatgaacatttatatttaattggcttgcgacaaccgcat
aataaagttaagctttccgatcttgacgcttatcataaactgatgcataggtggtga
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