Mageeibacillus indolicus: HMPREF0868_1512
Help
Entry
HMPREF0868_1512 CDS
T01181
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
clo
Mageeibacillus indolicus
Pathway
clo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
clo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HMPREF0868_1512 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clo03021
]
HMPREF0868_1512 (rpoA)
03400 DNA repair and recombination proteins [BR:
clo03400
]
HMPREF0868_1512 (rpoA)
Enzymes [BR:
clo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HMPREF0868_1512 (rpoA)
Transcription machinery [BR:
clo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HMPREF0868_1512 (rpoA)
DNA repair and recombination proteins [BR:
clo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HMPREF0868_1512 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ADC90910
UniProt:
D3QZ73
LinkDB
All DBs
Position
222761..223726
Genome browser
AA seq
321 aa
AA seq
DB search
MIETNKPVISTVALESNGSYGKFVVEPLDRGYGVTLGNSLRRVLLSSLPGAAVTAIRVEG
AFHEFSTVEGVIEDMTEIILNVKCIRVKLNADGPKTIYLNTEEGRTGVVTAGDIVTDEEV
QIMNPEQPIATLNGDARLFMELTVCSGIGYNSAERNKWPNQPIGVIPVDSIFTPVKKVNY
SVENTRVGQFTDFDKLTLEVWTDRTIAADTAVSNAANILMDHLQYFVDLQGGPTGTGTRS
YDGSGESNELLETAIEDMNFSVRTYNCLKRAGINVIGDLVIRSEDDMMKVRNLGKKSLEE
VIQILDEMGLSLAPGSDTNEQ
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacaaacaaaccggttatctcgaccgtcgctcttgagtcaaatggttcatat
ggtaaatttgtggtagagcctctggatcgaggctacggtgttacattgggcaattcctta
cggcgtgtcctgctgtcttcactccccggagccgcggttactgctattcgcgttgagggc
gcattccacgagttttcaacagtagaaggcgtaatcgaggatatgaccgaaatcatttta
aatgttaaatgtattcgtgttaaactcaatgccgacggcccaaaaacaatttacctcaat
accgaggaaggtcgtacaggtgttgttaccgccggtgatattgttacggatgaagaagta
cagataatgaatccggaacaaccgattgctacgctgaatggtgatgcccgtttatttatg
gaacttactgtatgttccggtatcggttacaacagtgcggagcgcaataaatggcctaat
caaccgatcggggttattccggttgattcgattttcacacctgtgaaaaaagtgaattat
tccgtcgaaaatacccgtgtcggccaattcacagattttgataaattgacccttgaggta
tggactgatcgaaccattgctgcggataccgccgtaagcaatgccgccaatatcttgatg
gatcacttgcaatatttcgtcgacttgcaaggtggacctactggtactgggactcgcagt
tatgacggatctggggaaagcaatgaattacttgaaacagcaattgaggatatgaacttc
tctgttcgtacctataactgtttgaaacgtgccggtattaatgtcatcggcgatttggtg
attcggagcgaagatgacatgatgaaagttcgaaatctcggcaagaagtctctggaagag
gtaatccagatccttgatgagatgggactgagcttggctcccggaagcgatacaaacgaa
caataa
DBGET
integrated database retrieval system
