Clostridium sp. MD294: C820_000091
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Entry
C820_000091 CDS
T10174
Symbol
uvrA
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
clod Clostridium sp. MD294
Pathway
clod03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C820_000091 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clod03400
]
C820_000091 (uvrA)
DNA repair and recombination proteins [BR:
clod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C820_000091 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C820_000091 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
RsgA_GTPase
AAA_16
AAA_21
nSTAND1
AAA_29
nSTAND3
AAA_33
AAA_22
cobW
DnaJ_CXXCXGXG
Viral_helicase1
IIGP
DUF7575
Motif
Other DBs
NCBI-ProteinID:
USF28717
LinkDB
All DBs
Position
complement(86823..89666)
Genome browser
AA seq
947 aa
AA seq
DB search
MSKNDIIIRGAKEHNLKNINLKIPRDKFVVFTGVSGSGKTSLAFDTIYAEGQRRYVESLS
SYARQFLGQMEKPDVEYIEGLSPAISIDQKTTSHNPRSTVGTVTEIYDYLRLLFARIGIP
HCPKCGKEIKKQTIDQIADQIMALSQRSKLQLLAPVVRARKGQHTKLLEDARKSGYVRAR
IDGILYELSEEIELEKNKKHNIEIVVDRLIVKEDMQKRLTESLETVSALSGGTIVVDVNM
GEQELIFSQNFSCTDCGINISEIEPRLFSFNNPAGACTVCTGLGRQMKFDIDLIVPNQQL
SILQGAIAAPGYQSIGNNKESMSRLLFDALAEKYHFSLNTPFKELSEQIKEIIFYGTKGE
KVNITYTNFRGTGTYEYQFDGIINNLQKRYEETSETMRIEYEEYMTNITCPSCNGKRLRS
EVLAVTVGDKNISEVTEMSVNAIQQFFKELVLTEKQSKIAKQILKEINARIQFLIDVGLE
YLTLSRPAGTLSGGEAQRIRLATQIGSGLVGVVYILDEPSIGLHQRDNDKLLSTLKHLRD
IGNSLIVVEHDEDTMLASDFIVDVGPGAGKAGGEIVFAGDVQDLIKCPNSITGDYISGKK
KIEIPSQRKEIQKDAVLKIIGATQNNLKNIDVTIPLGLFTCVTGVSGSGKSSLVNEILYK
RLAKDLNRARVKAGEHKDILGIEKLDKVINIDQSPIGRTPRSNPATYTGLFDMIRELFAQ
TTEANMRGYQKGRFSFNVKGGRCEACAGDGILKIEMHFLPDVYVPCDVCHGKRYNRETLE
VHYKGKTISDVLEMTVEEALIFFENIPKIKNKLQTLYDVGLSYVQLGQSSTTLSGGEAQR
VKLATELSKKSTGKTMYILDEPTTGLHTADVHKLVKIIQRLTEGGNTVVVIEHNLDVIKT
ADYIIDLGPEGGNKGGTMIASGTPEQICEVENSYTGIYLKKVLQKYE
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaaatgatattataataagaggagcgaaagaacacaatttaaaaaatattaat
ttaaaaatacctagagataaatttgtagtatttacaggagtaagtggttcaggaaaaaca
tctcttgcttttgatactatttatgcagaaggacaaagaagatatgtggagtcattgtct
tcttatgcaaggcagtttttaggacaaatggaaaagccagatgtagaatatatagaagga
ctttctcctgctatatctattgaccaaaaaacaacaagccacaatcctcgttctacagtg
ggaactgtaacagaaatatatgattatttgagattgctttttgctagaattggtatacca
cattgtccaaaatgtggcaaagaaatcaaaaaacaaacaatagaccaaatagcagaccaa
attatggcgttatcacagcgttctaaattgcagttattagcaccagtggttagggcaaga
aaaggacaacatacaaagctgttagaagacgctagaaaaagtggttatgtaagggcgaga
atagatggtatattgtatgaattatcagaagaaatagaactagaaaaaaataaaaaacat
aatattgaaattgtagtagatagattgatagtaaaagaagatatgcaaaaaagattgaca
gagtcattagaaacagtttctgcactttctggaggaactatagtagtagatgttaatatg
ggagagcaggaattaatatttagtcaaaattttagttgtacggattgtggtatcaatatt
tcagaaatagaaccaagattattttcatttaataatccagcgggtgcttgtaccgtttgt
acaggattaggaagacaaatgaaatttgatatagatttgatagtacctaatcaacaatta
agtatattgcagggagcaatagctgcaccagggtatcaatctataggaaataataaagaa
agtatgagtcgtttactttttgatgctctggctgaaaaatatcatttttcgttgaatacc
ccttttaaagagttgagtgaacagataaaagaaattatattttatggtacaaaaggggaa
aaagtaaatattacttatactaattttagaggaactggaacatatgaatatcaatttgat
ggaattataaataatttacaaaaaagatatgaagaaacatcagaaacaatgagaatagaa
tatgaagaatatatgacaaatattacctgtcctagttgtaatggaaaaaggcttcgttct
gaagtacttgcagttacagtaggagataaaaatatatcagaagtaacagaaatgtctgta
aatgcaatacagcagttttttaaagaattggtattaacagaaaaacagtctaaaattgcc
aaacaaatattaaaagaaatcaatgcacgtatacaatttttaatagatgtaggattagaa
tatttgacattatctagacctgctggtacactttcaggaggagaagcacaaaggatacgc
cttgcgacacaaataggttctggattggtaggggttgtgtatatattagatgagccaagt
ataggactgcatcaaagagataatgataaattgcttagtacattaaaacatttaagagat
ataggaaattctcttattgtagtagaacatgatgaagatactatgttagcatcagatttt
atagtagatgttggacctggtgctggaaaagcgggaggagaaattgtatttgctggtgat
gtgcaagatttgataaaatgcccaaattctattacaggagattatattagtggtaaaaag
aaaatagaaattccttctcaaagaaaagaaatacaaaaagatgctgtattaaaaataata
ggagcaacacaaaataatttaaaaaatattgatgttactattcccttagggttgttcact
tgtgttacgggagtaagcggttctggaaaaagttctcttgtaaatgaaatattgtataaa
agattagcaaaagacttaaatagagcaagagtaaaagcaggagaacataaagatattttg
ggaatagaaaaattagataaagtcatcaatattgaccaatcacctataggaaggacacct
agaagcaatccagcaacttatacagggctttttgatatgataagggaattatttgcccaa
acgacagaggcgaatatgagaggctatcaaaagggtagatttagttttaatgtaaaaggg
ggtagatgtgaggcgtgtgcaggagatggtatattaaaaatagaaatgcactttttgcct
gatgtgtatgtaccttgtgatgtttgtcatggtaagagatataatagagaaacattggag
gtacattataaaggaaagacaatatctgatgtattggaaatgacagtagaggaggcattg
atattttttgaaaatataccaaaaataaaaaataaattacaaacattgtatgatgttgga
ctaagttatgtgcagttgggacagtcttctacaacattgtcaggaggagaagcacaaaga
gtaaaattagcaacagaattaagtaaaaaaagcacaggaaaaacgatgtatatattagat
gaacctacaacaggattgcatacagcagatgtgcataaattagtaaaaatcatacaaaga
ttaacagagggaggaaataccgttgtagtgatagaacataatttagatgtaataaaaaca
gcagattatattatagatttagggccagaaggaggtaataaaggaggaacaatgatagct
tcaggcacaccagaacaaatttgtgaagtagaaaattcttatacaggaatttatttaaaa
aaagttttacagaaatatgagtaa
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