Clostridium sp. MD294: C820_000094
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Entry
C820_000094 CDS
T10174
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
clod Clostridium sp. MD294
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
C820_000094 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clod03019
]
C820_000094 (rnc)
03009 Ribosome biogenesis [BR:
clod03009
]
C820_000094 (rnc)
03036 Chromosome and associated proteins [BR:
clod03036
]
C820_000094 (rnc)
Enzymes [BR:
clod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
C820_000094 (rnc)
Messenger RNA biogenesis [BR:
clod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C820_000094 (rnc)
Ribosome biogenesis [BR:
clod03009
]
Eukaryotic type
90S particles
RNase
C820_000094 (rnc)
Prokaryotic type
rRNA processing factors
C820_000094 (rnc)
Chromosome and associated proteins [BR:
clod03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
C820_000094 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
USF28720
LinkDB
All DBs
Position
complement(97138..97833)
Genome browser
AA seq
231 aa
AA seq
DB search
MDTQQMLEFENKIKYTFSDKEILFLAFMHSSFANEQKKGKHENNERLEFLGDAVLDMVVS
EYMYRMYPQMPEGELTKLRASVVCEGSLAKLARQLEFGKYLFLGKGEETTGGRNRDSILA
DTFEAVIGAICIDGGMESVTKYILSFMEKEIQQTKDSFKMKDYKTHLQEVIQKTSRYPVK
YVIVSETGPDHSKSFVAEVHHINKVLGKGAGKSKKEAEQAAAQNALKKMEE
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggatacacaacaaatgctagagtttgaaaacaaaataaaatacacattttcagataaa
gaaatattgtttttggcatttatgcacagttcttttgcgaatgaacaaaaaaaaggaaaa
catgaaaacaatgaacgattggaatttttaggagatgctgtattagatatggtagtgagt
gaatatatgtatcgaatgtatccacaaatgccagaaggagaactcacaaaactgagagcg
agtgtggtttgtgaaggttctttagcaaagttagcaagacagttagaatttggaaaatat
ctttttttaggtaaaggagaagaaactacaggaggaagaaatagagattctatattggct
gatactttcgaggctgtcattggagcaatttgtattgatggtggtatggaaagtgtaacg
aaatacattttaagctttatggaaaaagaaatacaacaaacaaaagatagctttaaaatg
aaagattataaaacacatttacaggaagtaatacaaaaaacaagtagataccctgtaaaa
tatgttattgtgtcggaaacaggcccagaccacagcaaatcatttgtggcagaagtacat
catatcaataaagtgttaggaaaaggagcaggaaaaagtaaaaaagaagcagagcaggca
gcagcacaaaatgcactcaaaaaaatggaagaataa
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