Clostridium sp. MD294: C820_000392
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Entry
C820_000392 CDS
T10174
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
clod Clostridium sp. MD294
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clod03400
]
C820_000392
DNA repair and recombination proteins [BR:
clod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C820_000392
Archaeal homologous recombinant proteins
C820_000392
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
AAA_15
ABC_tran
AAA_21
AAA_16
HAT_PRP39_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
USF29009
LinkDB
All DBs
Position
complement(398098..400872)
Genome browser
AA seq
924 aa
AA seq
DB search
MKPVKLTISAFGPYAEKVNIDFEKLGEKGLYLITGDTGAGKTTIFDAITFALYGEASGNV
REANMFRSKYAKEDTPTYVEFTFLYQKKQYHIYRNPEYIRKREKGEGFTTQKADAVLTFP
DDRTPITKSKEVTKAVIELIGIDRNQFIQIAMIAQGDFLKLLLSKTEERSKIFREIFNTK
PYFLFQEKIKEEANILKQQYDDMNKNIVRYVKNICCNEKDDFYIPLSNLQSNNTIASIEE
VTDLAQKIIMKQQEELTVLKNHFEEIENKLEKVNKLLGKAENISKAKKDIQRAKNILEQK
QPLLYQLKQNVEMAQMQSPKIEELAVIIETENNKLTDYDELDRWNDTINQYHQNMKILKQ
YIENDTLKLKQIEQVLFNEKQTVNALKDIETIQSKLEAEKKELETTREIYREIFSSIKKY
DTTIKQFHIAQQKYEKTASICEDKKQQLILMERAFFDEQAGILASKLQKGKKCPVCGSIE
HPEIAKMTEKAPSREELENFKNDITNFEKEMSYFSINAGEIKGRVETLYQNIVVKSEKVI
GKCPFSDISMIIEQKGKQSTEQINAIQCHIQQINDEIKQKISSEKSIEQNEKKQLQMTEK
LQKAERDSIILQKEIENITIQIAKLKSNLKYENKKVASAKILEMKKEKSDIEQKIQQTQM
EFESCTALVEQQKIAIDTLEKQISNDIELDIEQLLQKQKQLTIVKNDTQYHIDNINVQYT
SNQKILYEIQKYGNEIEKIEKEYYFVKSLSDTVNGKITGKDKIMLETYIQMNYFERIIAK
ANVRFMIMSNGQYELKRKVDAENRVSQSGLELNVIDHYNGSERSVKTLSGGEAFKASLSL
ALGLSDEIQSCAGGIQIDAMFIDEGFGSLDEESLNQAINVLHHLTEGNRIIGIISHISEI
KERIEKQIVVKKAMIGGSYITIEI
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
gtgaagccagtaaaattaacaatatcggcttttggaccttatgcagagaaagtgaatatt
gattttgagaaattaggagaaaaaggattatatttgattactggagatacaggtgcaggt
aaaacaactatatttgacgctattacatttgctctttatggtgaagctagtggtaatgta
agagaagcaaatatgtttcgcagtaaatatgctaaagaggacacccctacttatgtagaa
tttacttttttatatcagaaaaagcaatatcatatttatagaaatccagaatatatcaga
aaaagagaaaaaggagaaggatttacaacacaaaaagcagatgcagtgttgacatttcct
gacgatagaacacctattacaaaatcaaaagaagttacaaaagcagtaatagagttaata
ggaattgacagaaatcaatttatacaaattgctatgattgcacagggagattttttaaaa
ttacttctttctaaaacggaagagcgtagcaaaatatttagagaaatatttaatacaaaa
ccttattttttatttcaagaaaaaataaaagaggaagcaaatattttaaaacaacaatat
gatgatatgaataaaaatattgtaagatatgtaaaaaatatttgctgtaatgagaaagat
gatttttatattcctttaagtaatttacagtcaaacaacacaatagcttctatagaagaa
gtgactgatttagcacaaaaaatcattatgaaacaacaagaggagttgactgttttaaaa
aatcattttgaagagatagaaaacaaattagaaaaagtaaataaattgttaggaaaagca
gaaaatatttcaaaagcgaaaaaagatatacaaagagcaaaaaatatattagaacaaaaa
cagccactattatatcagttaaaacagaatgtagaaatggctcaaatgcaatcaccaaaa
atagaggaattagcagttatcattgaaacagaaaataataaattaacagattatgatgaa
ctagatagatggaatgatacaataaatcaataccaccaaaatatgaaaatattaaaacaa
tatatagaaaatgatactttaaaattaaagcaaatagaacaagtgctattcaatgaaaaa
caaacagtcaatgcactaaaagacatagaaacaatacagtcaaagctagaagcagaaaaa
aaagaactagaaaccacaagagaaatttatagagaaatttttagttctattaaaaagtat
gatactacaataaagcaatttcatatagcacagcaaaaatatgaaaaaacagcatcaatt
tgtgaagacaaaaaacagcagttaattctaatggaaagagcattttttgatgaacaagca
ggaatattagcatctaaattgcaaaaaggaaaaaaatgtcctgtttgtggttctatagaa
caccctgaaattgcaaaaatgactgaaaaagcacctagtagagaagaattagaaaatttt
aaaaatgatattacgaattttgaaaaagaaatgtcttattttagtataaatgcaggagaa
ataaaaggaagagtagaaacattataccaaaatattgtagtcaaatcagaaaaagtaatt
ggaaaatgtcctttttcagatatttcaatgataatagaacaaaaaggaaagcaaagcaca
gaacaaattaatgcaatacaatgtcatatacaacaaattaatgacgaaataaaacaaaaa
atttcttcagaaaaaagtatagaacaaaatgaaaaaaaacaattacaaatgacagaaaaa
ttacaaaaagcagaaagagatagtattattttacaaaaagaaatagaaaatattactata
caaatagcaaagctaaaaagtaatttaaaatatgaaaataaaaaagttgcttctgctaaa
attttagaaatgaaaaaagaaaaaagtgatatagagcaaaaaatacagcaaacacaaatg
gaatttgaaagttgtactgcattagtagaacaacaaaaaatagcaatagacacattagaa
aaacaaatttcaaatgatatagaattagatatagaacagttacttcaaaaacaaaaacaa
cttactatagtaaaaaatgatacacaatatcatatagataatataaatgtgcaatatact
tctaatcaaaaaatactttatgagatacaaaaatatggtaatgaaatagaaaaaatagaa
aaagagtattattttgtaaaaagcttatcagatactgtaaatggaaaaattacaggaaaa
gataaaataatgctggaaacatatatacaaatgaactattttgaaagaataatagcaaag
gcaaatgttagatttatgataatgagtaatggccagtatgaattaaaaagaaaagtagat
gcagaaaatcgtgttagtcaaagtggtttggaattaaatgttattgaccactataatggt
tcagaacgtagtgtaaaaacattatctggaggagaagcttttaaagcttcactttctctt
gcattgggtctttctgacgaaatacaatcatgtgctggaggtatacaaatagatgctatg
tttattgatgaagggtttggctctttagatgaagagtcgcttaaccaagccatcaatgta
cttcatcatttgacagaaggaaatagaataataggtattatttctcatatttcagaaata
aaagagcgtattgaaaaacagattgttgtaaaaaaagcaatgataggaggcagttatatc
acaatagaaatataa
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