Clostridium sp. MD294: C820_000460
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Entry
C820_000460 CDS
T10174
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
clod Clostridium sp. MD294
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clod03009
]
C820_000460 (rimO)
Enzymes [BR:
clod01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C820_000460 (rimO)
Ribosome biogenesis [BR:
clod03009
]
Prokaryotic type
ribosomal protein modification factors
C820_000460 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
Glyco_hydro_42
UvrD_C
ALS2CR8
FGGY_C_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
USF29077
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All DBs
Position
467427..468785
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AA seq
452 aa
AA seq
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MAATVAFTSLGCDKNRVDSEVMLGILRKNGFEIVADEQKADLIVINTCCFIKDALEESIE
TILEMAEYKKNAVCKGIIVAGCLGQRYEKEIFQEMPEVDAIVGTTAYEDIAEVANRILQG
EKSIKHIQSIDKAMINENAKLRMVSTAGYYAYLKISEGCDNHCTYCAIPSMRGKHRSRTI
ESLVEETKLLAKQGVKEIVIVAQDTSIYGRDLYGEPKLHILLEKLCAVEDIAWIRLLYCY
PETLTDETIQVMAKQSKICHYIDLPIQHANDTILKKMGRKSTQKILKEKITKLREAMPDI
AIRTTFIVGFPQETQQEFEDLMQFTQEMRFEKLGVFCYSQEEGTPAANMDYQIEEEIKEQ
RKNAVMELQKSISAQYCQKQINTIKEVIVEGKLPQENIYCGRTMQDAPDIDGLVFFSSEE
ELLSGDFIKVAVKEASDYDLIGELYYGNEFSK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacagttgcatttacttctttagggtgtgacaaaaatagagtagatagtgaa
gtaatgttaggaatattgcgtaaaaacggctttgaaatcgtagctgatgaacaaaaagca
gatttaattgtaataaacacctgctgttttataaaagatgctctagaagaaagtattgaa
accatattagaaatggcagaatacaaaaaaaatgctgtttgtaaaggtattattgtagca
ggttgtttagggcaaagatatgaaaaagaaatatttcaagaaatgccagaagttgatgct
atagtaggcacaacagcatatgaagatattgcagaagtagcaaatcgtatattacaaggg
gaaaaaagtataaaacatattcaaagcattgacaaagctatgataaatgaaaatgcaaaa
cttcgtatggtttctacagcaggttattacgcatatttaaaaatatcagaaggttgtgat
aatcactgcacttattgtgccatacccagtatgaggggaaagcatagaagtcgtacaata
gaaagccttgtagaagaaacaaaattattagcaaaacaaggtgtaaaagaaattgttatt
gtggcacaagatacttctatctatggtagagatttatatggcgagccaaaactgcatata
cttttggaaaaactttgtgctgtggaagacattgcatggatacgtcttttatattgttat
cctgaaacacttacagatgaaacaatacaagttatggcaaaacaatctaaaatatgtcat
tatattgacttacctatacaacacgctaatgatactatattaaaaaaaatgggtagaaaa
agcactcaaaaaatattaaaagaaaaaataacaaaattaagagaagctatgcctgatatt
gctatacgtactacatttatagtaggatttcctcaagaaacacaacaggaatttgaggac
ttaatgcagtttacacaagaaatgcgttttgaaaaattaggtgtattttgttattctcaa
gaagaaggcacaccagcggcaaatatggactatcaaatagaagaagaaataaaagaacag
agaaaaaatgctgttatggaattacagaaatctatatctgcacaatactgtcaaaagcaa
atcaataccataaaagaagtaattgtagagggaaaattacctcaagaaaatatttattgt
ggtagaacaatgcaggacgcaccagatattgatggacttgtatttttttcatcagaagaa
gagttactttctggagattttataaaagtggctgtaaaagaagcaagtgactacgatttg
attggagagttatattatggaaatgaatttagcaaataa
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