Clostridium sp. MD294: C820_000932
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Entry
C820_000932 CDS
T10174
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
clod Clostridium sp. MD294
Pathway
clod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C820_000932 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clod03400
]
C820_000932 (recO)
DNA repair and recombination proteins [BR:
clod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C820_000932 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C820_000932 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
SlpA
Choline_bind_3
Motif
Other DBs
NCBI-ProteinID:
USF29541
LinkDB
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Position
952940..953674
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AA seq
244 aa
AA seq
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MATEVIRGIVLKEMPKGETSKQIIVLAKEKGKIWITAKGARKQKSKLLAGTQLFCYGDFQ
VYESKKYYYVDQIDIIESFFDLRLDIDRLSQAMYMIDLVEKTAFMGMEQDNILQLLLKTL
QILCKGKCIPELASRVFEMKFLQIAGVMPNLTQQCCVCGKEAKQYFDAISGAMVCNEHKR
GGRLLSPAAICAMNFVFSNDIKNAFQFSVSKQVMKELYKILEEYIAIHINMQLQTRDFNK
KIQF
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
ttggcaacagaagtaattaggggtattgttttaaaagaaatgccaaagggagaaacaagc
aaacagattattgtattggcaaaagaaaagggaaaaatatggataacagcaaaaggagct
agaaaacaaaaaagtaaattgcttgctggaacacaattattttgctatggagattttcaa
gtatatgagagcaaaaaatattattatgtagaccagattgatataatagaaagttttttt
gatttgcgtttagatatagatagattgtcacaggcaatgtatatgatagatttagtggaa
aaaactgcttttatgggtatggaacaagataatatattacagttgcttttgaaaacacta
caaatattgtgtaaaggaaaatgtattccagaattagcaagtcgtgtgtttgaaatgaaa
tttttgcaaattgcaggtgttatgccaaatttgacacaacaatgttgtgtttgtggaaaa
gaagcgaaacaatattttgatgctatttcaggggcaatggtgtgcaatgagcataaaaga
ggcggcagattgctgtcaccagcagcgatttgtgctatgaattttgtattctcaaatgat
ataaaaaatgcttttcagttttctgtttcaaaacaagtaatgaaagaattgtacaaaata
ttagaagaatatattgcaatacatatcaatatgcagttgcagacaagagattttaacaaa
aaaatacagttttga
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